Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 RNU6-956P-201ENST00000458868 103 ntBASIC7.19□□□□□ -1.26
USP11P51784 AL024509.2-201ENST00000493462 493 ntBASIC7.19□□□□□ -1.26
USP11P51784 RN7SL362P-201ENST00000494228 267 ntBASIC7.19□□□□□ -1.26
USP11P51784 ARL4AP1-201ENST00000503220 705 ntBASIC7.19□□□□□ -1.26
USP11P51784 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC7.19□□□□□ -1.26
USP11P51784 AC138853.1-201ENST00000503549 823 ntBASIC7.19□□□□□ -1.26
USP11P51784 DSTNP2-201ENST00000504533 515 ntBASIC7.19□□□□□ -1.26
USP11P51784 AC004069.2-201ENST00000505438 1114 ntBASIC7.19□□□□□ -1.26
USP11P51784 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
USP11P51784 AC005178.1-201ENST00000508392 440 ntBASIC7.19□□□□□ -1.26
USP11P51784 OR4D12P-201ENST00000509361 911 ntBASIC7.19□□□□□ -1.26
USP11P51784 DUXAP2-201ENST00000519198 589 ntBASIC7.19□□□□□ -1.26
USP11P51784 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC7.19□□□□□ -1.26
USP11P51784 AC036111.2-201ENST00000533247 901 ntBASIC7.19□□□□□ -1.26
USP11P51784 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC7.19□□□□□ -1.26
USP11P51784 AC010198.2-201ENST00000550612 259 ntBASIC7.19□□□□□ -1.26
USP11P51784 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC7.19□□□□□ -1.26
USP11P51784 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC7.19□□□□□ -1.26
USP11P51784 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC7.19□□□□□ -1.26
USP11P51784 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC7.19□□□□□ -1.26
USP11P51784 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
USP11P51784 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC7.19□□□□□ -1.26
USP11P51784 AC091193.1-201ENST00000604640 448 ntBASIC7.19□□□□□ -1.26
USP11P51784 AL139418.1-201ENST00000613613 177 ntBASIC7.19□□□□□ -1.26
USP11P51784 MIR7159-201ENST00000620587 66 ntBASIC7.19□□□□□ -1.26
USP11P51784 AC095031.1-201ENST00000623685 672 ntBASIC7.19□□□□□ -1.26
USP11P51784 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC7.19□□□□□ -1.26
USP11P51784 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
USP11P51784 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
USP11P51784 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC7.19□□□□□ -1.26
USP11P51784 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
USP11P51784 TMCC1P1-201ENST00000518897 1980 ntBASIC7.19□□□□□ -1.26
USP11P51784 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC7.19□□□□□ -1.26
USP11P51784 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
USP11P51784 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
USP11P51784 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
USP11P51784 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
USP11P51784 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
USP11P51784 IARS-213ENST00000627121 4587 ntTSL 5 BASIC7.18□□□□□ -1.26
USP11P51784 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
USP11P51784 AL603750.1-201ENST00000624216 1717 ntBASIC7.18□□□□□ -1.26
USP11P51784 CREM-217ENST00000439705 2306 ntTSL 5 BASIC7.18□□□□□ -1.26
USP11P51784 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
USP11P51784 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
USP11P51784 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC7.18□□□□□ -1.26
USP11P51784 AC090181.3-201ENST00000624777 1514 ntBASIC7.18□□□□□ -1.26
USP11P51784 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
USP11P51784 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
USP11P51784 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC7.18□□□□□ -1.26
USP11P51784 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
USP11P51784 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
USP11P51784 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
USP11P51784 VDAC2P1-201ENST00000399358 958 ntBASIC7.18□□□□□ -1.26
USP11P51784 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC7.18□□□□□ -1.26
USP11P51784 BTF3P8-201ENST00000414577 526 ntBASIC7.18□□□□□ -1.26
USP11P51784 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC7.18□□□□□ -1.26
USP11P51784 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC7.18□□□□□ -1.26
USP11P51784 CYP4F30P-202ENST00000420048 405 ntBASIC7.18□□□□□ -1.26
USP11P51784 RPL24P2-201ENST00000421023 475 ntBASIC7.18□□□□□ -1.26
USP11P51784 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
USP11P51784 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC7.18□□□□□ -1.26
USP11P51784 AC007563.3-201ENST00000433233 371 ntBASIC7.18□□□□□ -1.26
USP11P51784 USP9YP35-201ENST00000435696 412 ntBASIC7.18□□□□□ -1.26
USP11P51784 ELOCP10-201ENST00000440624 327 ntBASIC7.18□□□□□ -1.26
USP11P51784 RPS27P5-201ENST00000444247 244 ntBASIC7.18□□□□□ -1.26
USP11P51784 SEPT14P24-201ENST00000447236 180 ntBASIC7.18□□□□□ -1.26
USP11P51784 CCNB1IP1P3-201ENST00000454702 829 ntBASIC7.18□□□□□ -1.26
USP11P51784 AC005017.1-201ENST00000482002 490 ntBASIC7.18□□□□□ -1.26
USP11P51784 FTH1P8-201ENST00000498161 514 ntBASIC7.18□□□□□ -1.26
USP11P51784 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
USP11P51784 AC112198.1-201ENST00000505369 1220 ntBASIC7.18□□□□□ -1.26
USP11P51784 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC7.18□□□□□ -1.26
USP11P51784 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC7.18□□□□□ -1.26
USP11P51784 RNA5SP206-201ENST00000516703 121 ntBASIC7.18□□□□□ -1.26
USP11P51784 RN7SKP183-201ENST00000517169 324 ntBASIC7.18□□□□□ -1.26
USP11P51784 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC7.18□□□□□ -1.26
USP11P51784 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC7.18□□□□□ -1.26
USP11P51784 BCAS2P1-201ENST00000528022 632 ntBASIC7.18□□□□□ -1.26
USP11P51784 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC7.18□□□□□ -1.26
USP11P51784 AP000873.5-201ENST00000533906 236 ntBASIC7.18□□□□□ -1.26
USP11P51784 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
USP11P51784 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
USP11P51784 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC7.18□□□□□ -1.26
USP11P51784 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC7.18□□□□□ -1.26
USP11P51784 AC011260.1-201ENST00000578420 472 ntBASIC7.18□□□□□ -1.26
USP11P51784 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC7.18□□□□□ -1.26
USP11P51784 VN1R83P-201ENST00000595685 445 ntBASIC7.18□□□□□ -1.26
USP11P51784 ELOCP34-201ENST00000604436 327 ntBASIC7.18□□□□□ -1.26
USP11P51784 AC006270.3-201ENST00000605967 1036 ntBASIC7.18□□□□□ -1.26
USP11P51784 AP003117.2-201ENST00000606010 545 ntBASIC7.18□□□□□ -1.26
USP11P51784 AC007684.1-201ENST00000609671 477 ntBASIC7.18□□□□□ -1.26
USP11P51784 Z99129.1-201ENST00000612510 255 ntBASIC7.18□□□□□ -1.26
USP11P51784 AC013476.2-201ENST00000614456 459 ntBASIC7.18□□□□□ -1.26
USP11P51784 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC7.18□□□□□ -1.26
USP11P51784 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC7.18□□□□□ -1.26
USP11P51784 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC7.18□□□□□ -1.26
USP11P51784 FGG-205ENST00000407946 1636 ntTSL 5 BASIC7.18□□□□□ -1.26
USP11P51784 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC7.18□□□□□ -1.26
USP11P51784 FTO-215ENST00000636491 1676 ntTSL 5 BASIC7.18□□□□□ -1.26
USP11P51784 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms