Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
CPT1AP50416 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
CPT1AP50416 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CPT1AP50416 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CPT1AP50416 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CPT1AP50416 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.18□□□□□ -1.42
CPT1AP50416 MIR133B-201ENST00000362210 119 ntBASIC6.18□□□□□ -1.42
CPT1AP50416 RNU6-1251P-201ENST00000364502 107 ntBASIC6.18□□□□□ -1.42
CPT1AP50416 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CPT1AP50416 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CPT1AP50416 RPL11P3-201ENST00000395256 523 ntBASIC6.18□□□□□ -1.42
CPT1AP50416 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC6.18□□□□□ -1.42
CPT1AP50416 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC6.18□□□□□ -1.42
CPT1AP50416 CBX1P3-201ENST00000413296 527 ntBASIC6.18□□□□□ -1.42
CPT1AP50416 GLUD1P9-201ENST00000420997 1173 ntBASIC6.18□□□□□ -1.42
CPT1AP50416 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC6.18□□□□□ -1.42
CPT1AP50416 RPS3AP38-201ENST00000435889 763 ntBASIC6.18□□□□□ -1.42
CPT1AP50416 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC6.18□□□□□ -1.42
CPT1AP50416 RPS18P6-201ENST00000476880 458 ntBASIC6.18□□□□□ -1.42
CPT1AP50416 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.18□□□□□ -1.42
CPT1AP50416 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.18□□□□□ -1.42
CPT1AP50416 NAMPTP2-201ENST00000505629 1115 ntBASIC6.18□□□□□ -1.42
CPT1AP50416 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CPT1AP50416 C1DP5-201ENST00000525775 383 ntBASIC6.18□□□□□ -1.42
CPT1AP50416 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC6.18□□□□□ -1.42
CPT1AP50416 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CPT1AP50416 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC6.18□□□□□ -1.42
CPT1AP50416 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC6.18□□□□□ -1.42
CPT1AP50416 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC6.18□□□□□ -1.42
CPT1AP50416 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
CPT1AP50416 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC6.18□□□□□ -1.42
CPT1AP50416 AL121839.1-201ENST00000556233 1185 ntBASIC6.18□□□□□ -1.42
CPT1AP50416 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC6.18□□□□□ -1.42
CPT1AP50416 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6.18□□□□□ -1.42
CPT1AP50416 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.18□□□□□ -1.42
CPT1AP50416 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CPT1AP50416 AC096947.1-201ENST00000603233 470 ntBASIC6.18□□□□□ -1.42
CPT1AP50416 AL133481.2-203ENST00000607558 139 ntBASIC6.18□□□□□ -1.42
CPT1AP50416 AC027449.1-201ENST00000608890 407 ntBASIC6.18□□□□□ -1.42
CPT1AP50416 AL138960.1-201ENST00000613838 513 ntBASIC6.18□□□□□ -1.42
CPT1AP50416 AC008147.4-201ENST00000617570 1204 ntBASIC6.18□□□□□ -1.42
CPT1AP50416 RMST_5.1-201ENST00000618704 126 ntBASIC6.18□□□□□ -1.42
CPT1AP50416 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC6.18□□□□□ -1.42
CPT1AP50416 AC019080.5-201ENST00000624891 757 ntBASIC6.18□□□□□ -1.42
CPT1AP50416 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC6.18□□□□□ -1.42
CPT1AP50416 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
CPT1AP50416 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CPT1AP50416 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
CPT1AP50416 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CPT1AP50416 AC018809.2-201ENST00000602436 3823 ntBASIC6.18□□□□□ -1.42
CPT1AP50416 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CPT1AP50416 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CPT1AP50416 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CPT1AP50416 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.17□□□□□ -1.42
CPT1AP50416 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.17□□□□□ -1.42
CPT1AP50416 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.17□□□□□ -1.42
CPT1AP50416 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.17□□□□□ -1.42
CPT1AP50416 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
CPT1AP50416 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
CPT1AP50416 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CPT1AP50416 MTATP6P31-201ENST00000406985 692 ntBASIC6.17□□□□□ -1.42
CPT1AP50416 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CPT1AP50416 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.17□□□□□ -1.42
CPT1AP50416 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC6.17□□□□□ -1.42
CPT1AP50416 RNGTTP1-201ENST00000420965 728 ntBASIC6.17□□□□□ -1.42
CPT1AP50416 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC6.17□□□□□ -1.42
CPT1AP50416 TMEM183AP1-205ENST00000432739 290 ntBASIC6.17□□□□□ -1.42
CPT1AP50416 AC011242.1-201ENST00000433596 1158 ntBASIC6.17□□□□□ -1.42
CPT1AP50416 AL390879.1-201ENST00000439143 386 ntBASIC6.17□□□□□ -1.42
CPT1AP50416 RPS11P7-201ENST00000442125 465 ntBASIC6.17□□□□□ -1.42
CPT1AP50416 AL596266.1-201ENST00000448132 400 ntBASIC6.17□□□□□ -1.42
CPT1AP50416 CBX1P5-201ENST00000475330 559 ntBASIC6.17□□□□□ -1.42
CPT1AP50416 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC6.17□□□□□ -1.42
CPT1AP50416 SCARNA16.4-201ENST00000516956 187 ntBASIC6.17□□□□□ -1.42
CPT1AP50416 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC6.17□□□□□ -1.42
CPT1AP50416 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.17□□□□□ -1.42
CPT1AP50416 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.17□□□□□ -1.42
CPT1AP50416 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.17□□□□□ -1.42
CPT1AP50416 DHFRP1-201ENST00000579682 559 ntBASIC6.17□□□□□ -1.42
CPT1AP50416 AC087763.1-201ENST00000603391 286 ntBASIC6.17□□□□□ -1.42
CPT1AP50416 HIRAP1-201ENST00000605318 787 ntBASIC6.17□□□□□ -1.42
CPT1AP50416 AC009163.6-201ENST00000612367 342 ntBASIC6.17□□□□□ -1.42
CPT1AP50416 AC068880.4-201ENST00000623082 495 ntBASIC6.17□□□□□ -1.42
CPT1AP50416 OR5AC4P-202ENST00000642086 985 ntBASIC6.17□□□□□ -1.42
CPT1AP50416 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CPT1AP50416 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
CPT1AP50416 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
CPT1AP50416 AC022164.1-201ENST00000568767 2673 ntBASIC6.17□□□□□ -1.42
CPT1AP50416 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CPT1AP50416 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
CPT1AP50416 AL356317.1-201ENST00000396110 1436 ntBASIC6.16□□□□□ -1.42
CPT1AP50416 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.16□□□□□ -1.42
CPT1AP50416 MTCO1P4-201ENST00000520516 1409 ntBASIC6.16□□□□□ -1.42
CPT1AP50416 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CPT1AP50416 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CPT1AP50416 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
CPT1AP50416 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CPT1AP50416 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CPT1AP50416 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CPT1AP50416 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms