Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.58□□□□□ -1.52
LHX1P48742 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
LHX1P48742 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
LHX1P48742 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.58□□□□□ -1.52
LHX1P48742 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LHX1P48742 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
LHX1P48742 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.57□□□□□ -1.52
LHX1P48742 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.57□□□□□ -1.52
LHX1P48742 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
LHX1P48742 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LHX1P48742 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.57□□□□□ -1.52
LHX1P48742 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
LHX1P48742 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.57□□□□□ -1.52
LHX1P48742 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.57□□□□□ -1.52
LHX1P48742 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LHX1P48742 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
LHX1P48742 U3.23-201ENST00000391132 200 ntBASIC5.57□□□□□ -1.52
LHX1P48742 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.57□□□□□ -1.52
LHX1P48742 AL356968.2-201ENST00000412769 1257 ntBASIC5.57□□□□□ -1.52
LHX1P48742 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.57□□□□□ -1.52
LHX1P48742 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.57□□□□□ -1.52
LHX1P48742 AC090018.1-201ENST00000434369 367 ntBASIC5.57□□□□□ -1.52
LHX1P48742 LYPLA1P1-201ENST00000434514 622 ntBASIC5.57□□□□□ -1.52
LHX1P48742 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.57□□□□□ -1.52
LHX1P48742 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.57□□□□□ -1.52
LHX1P48742 MTND6P5-201ENST00000448266 512 ntBASIC5.57□□□□□ -1.52
LHX1P48742 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.57□□□□□ -1.52
LHX1P48742 RN7SL189P-201ENST00000468631 289 ntBASIC5.57□□□□□ -1.52
LHX1P48742 RPL7P41-201ENST00000485823 957 ntBASIC5.57□□□□□ -1.52
LHX1P48742 AC021193.1-201ENST00000511607 420 ntBASIC5.57□□□□□ -1.52
LHX1P48742 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC5.57□□□□□ -1.52
LHX1P48742 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.57□□□□□ -1.52
LHX1P48742 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.57□□□□□ -1.52
LHX1P48742 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LHX1P48742 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.57□□□□□ -1.52
LHX1P48742 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.57□□□□□ -1.52
LHX1P48742 MIR3691-201ENST00000578066 90 ntBASIC5.57□□□□□ -1.52
LHX1P48742 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.57□□□□□ -1.52
LHX1P48742 AC005229.3-201ENST00000603438 323 ntBASIC5.57□□□□□ -1.52
LHX1P48742 AC008814.1-201ENST00000603797 406 ntBASIC5.57□□□□□ -1.52
LHX1P48742 MIR7155-201ENST00000615925 56 ntBASIC5.57□□□□□ -1.52
LHX1P48742 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
LHX1P48742 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
LHX1P48742 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LHX1P48742 AC023421.1-201ENST00000590535 1785 ntBASIC5.57□□□□□ -1.52
LHX1P48742 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
LHX1P48742 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LHX1P48742 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.57□□□□□ -1.52
LHX1P48742 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LHX1P48742 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.57□□□□□ -1.52
LHX1P48742 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
LHX1P48742 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LHX1P48742 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LHX1P48742 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LHX1P48742 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LHX1P48742 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LHX1P48742 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
LHX1P48742 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
LHX1P48742 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
LHX1P48742 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
LHX1P48742 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LHX1P48742 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LHX1P48742 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.56□□□□□ -1.52
LHX1P48742 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.56□□□□□ -1.52
LHX1P48742 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LHX1P48742 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
LHX1P48742 RNA5SP305-201ENST00000362665 119 ntBASIC5.56□□□□□ -1.52
LHX1P48742 RNU6-697P-201ENST00000363348 107 ntBASIC5.56□□□□□ -1.52
LHX1P48742 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LHX1P48742 RNU1-74P-201ENST00000384108 171 ntBASIC5.56□□□□□ -1.52
LHX1P48742 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.56□□□□□ -1.52
LHX1P48742 AL139039.2-201ENST00000407436 479 ntBASIC5.56□□□□□ -1.52
LHX1P48742 RNU6-564P-201ENST00000410983 104 ntBASIC5.56□□□□□ -1.52
LHX1P48742 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.56□□□□□ -1.52
LHX1P48742 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.56□□□□□ -1.52
LHX1P48742 EI24P4-201ENST00000423683 1078 ntBASIC5.56□□□□□ -1.52
LHX1P48742 NPM1P18-201ENST00000434232 732 ntBASIC5.56□□□□□ -1.52
LHX1P48742 CEACAMP7-201ENST00000444105 496 ntBASIC5.56□□□□□ -1.52
LHX1P48742 RPL31P53-201ENST00000457065 348 ntBASIC5.56□□□□□ -1.52
LHX1P48742 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.56□□□□□ -1.52
LHX1P48742 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.56□□□□□ -1.52
LHX1P48742 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.56□□□□□ -1.52
LHX1P48742 AC026782.2-201ENST00000510845 636 ntBASIC5.56□□□□□ -1.52
LHX1P48742 HMGN2P47-201ENST00000559378 272 ntBASIC5.56□□□□□ -1.52
LHX1P48742 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LHX1P48742 RN7SL708P-201ENST00000580952 299 ntBASIC5.56□□□□□ -1.52
LHX1P48742 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.56□□□□□ -1.52
LHX1P48742 BX322635.1-201ENST00000605804 496 ntBASIC5.56□□□□□ -1.52
LHX1P48742 AC012467.1-201ENST00000607740 256 ntBASIC5.56□□□□□ -1.52
LHX1P48742 AP005131.7-201ENST00000610087 611 ntBASIC5.56□□□□□ -1.52
LHX1P48742 AC239803.2-201ENST00000610161 430 ntBASIC5.56□□□□□ -1.52
LHX1P48742 AL162574.1-201ENST00000615702 950 ntBASIC5.56□□□□□ -1.52
LHX1P48742 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.56□□□□□ -1.52
LHX1P48742 AC104820.1-201ENST00000624183 307 ntBASIC5.56□□□□□ -1.52
LHX1P48742 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
LHX1P48742 LINC01739-205ENST00000641890 573 ntBASIC5.56□□□□□ -1.52
LHX1P48742 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LHX1P48742 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.56□□□□□ -1.52
LHX1P48742 AL355834.1-201ENST00000556602 3965 ntBASIC5.56□□□□□ -1.52
LHX1P48742 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms