Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SLC6A12P48065 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
SLC6A12P48065 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SLC6A12P48065 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SLC6A12P48065 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.16□□□□□ -1.58
SLC6A12P48065 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SLC6A12P48065 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SLC6A12P48065 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SLC6A12P48065 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
SLC6A12P48065 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
SLC6A12P48065 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
SLC6A12P48065 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.15□□□□□ -1.58
SLC6A12P48065 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.58
SLC6A12P48065 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SLC6A12P48065 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.15□□□□□ -1.58
SLC6A12P48065 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SLC6A12P48065 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
SLC6A12P48065 SMG1P7-201ENST00000565246 2704 ntBASIC5.15□□□□□ -1.58
SLC6A12P48065 AC010132.2-201ENST00000295493 1043 ntBASIC5.15□□□□□ -1.59
SLC6A12P48065 RN7SKP153-201ENST00000365026 316 ntBASIC5.15□□□□□ -1.59
SLC6A12P48065 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
SLC6A12P48065 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.15□□□□□ -1.59
SLC6A12P48065 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.15□□□□□ -1.59
SLC6A12P48065 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC5.15□□□□□ -1.59
SLC6A12P48065 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SLC6A12P48065 MGAT2P2-201ENST00000427194 797 ntBASIC5.15□□□□□ -1.59
SLC6A12P48065 AL121776.1-201ENST00000429337 372 ntBASIC5.15□□□□□ -1.59
SLC6A12P48065 AC090018.1-201ENST00000434369 367 ntBASIC5.15□□□□□ -1.59
SLC6A12P48065 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.15□□□□□ -1.59
SLC6A12P48065 OR52E3P-201ENST00000452083 936 ntBASIC5.15□□□□□ -1.59
SLC6A12P48065 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.15□□□□□ -1.59
SLC6A12P48065 RPL7P45-201ENST00000455851 743 ntBASIC5.15□□□□□ -1.59
SLC6A12P48065 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC5.15□□□□□ -1.59
SLC6A12P48065 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.15□□□□□ -1.59
SLC6A12P48065 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.15□□□□□ -1.59
SLC6A12P48065 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC5.15□□□□□ -1.59
SLC6A12P48065 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.15□□□□□ -1.59
SLC6A12P48065 RN7SL547P-201ENST00000490793 290 ntBASIC5.15□□□□□ -1.59
SLC6A12P48065 AC022133.1-201ENST00000490961 571 ntBASIC5.15□□□□□ -1.59
SLC6A12P48065 AL136038.1-201ENST00000497246 351 ntBASIC5.15□□□□□ -1.59
SLC6A12P48065 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
SLC6A12P48065 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC5.15□□□□□ -1.59
SLC6A12P48065 RPEP1-201ENST00000504507 658 ntBASIC5.15□□□□□ -1.59
SLC6A12P48065 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.15□□□□□ -1.59
SLC6A12P48065 AC117525.1-201ENST00000515228 503 ntBASIC5.15□□□□□ -1.59
SLC6A12P48065 RNA5SP373-201ENST00000517271 95 ntBASIC5.15□□□□□ -1.59
SLC6A12P48065 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC5.15□□□□□ -1.59
SLC6A12P48065 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.15□□□□□ -1.59
SLC6A12P48065 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.15□□□□□ -1.59
SLC6A12P48065 HMGB1P40-201ENST00000525121 540 ntBASIC5.15□□□□□ -1.59
SLC6A12P48065 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.15□□□□□ -1.59
SLC6A12P48065 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
SLC6A12P48065 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.15□□□□□ -1.59
SLC6A12P48065 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SLC6A12P48065 AC126177.5-201ENST00000549599 178 ntBASIC5.15□□□□□ -1.59
SLC6A12P48065 NMNAT1P5-201ENST00000559657 841 ntBASIC5.15□□□□□ -1.59
SLC6A12P48065 AC040958.1-201ENST00000561102 201 ntBASIC5.15□□□□□ -1.59
SLC6A12P48065 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.15□□□□□ -1.59
SLC6A12P48065 AL589674.2-201ENST00000604304 337 ntBASIC5.15□□□□□ -1.59
SLC6A12P48065 AC005252.1-201ENST00000604518 1063 ntBASIC5.15□□□□□ -1.59
SLC6A12P48065 AL162431.4-201ENST00000604674 411 ntBASIC5.15□□□□□ -1.59
SLC6A12P48065 AL135786.2-201ENST00000608422 615 ntBASIC5.15□□□□□ -1.59
SLC6A12P48065 AC092574.1-201ENST00000609771 420 ntBASIC5.15□□□□□ -1.59
SLC6A12P48065 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.15□□□□□ -1.59
SLC6A12P48065 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SLC6A12P48065 AC004241.3-201ENST00000611728 517 ntBASIC5.15□□□□□ -1.59
SLC6A12P48065 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
SLC6A12P48065 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
SLC6A12P48065 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.15□□□□□ -1.59
SLC6A12P48065 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
SLC6A12P48065 AP001284.1-201ENST00000528393 2118 ntBASIC5.15□□□□□ -1.59
SLC6A12P48065 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SLC6A12P48065 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SLC6A12P48065 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SLC6A12P48065 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SLC6A12P48065 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SLC6A12P48065 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.14□□□□□ -1.59
SLC6A12P48065 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SLC6A12P48065 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SLC6A12P48065 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SLC6A12P48065 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SLC6A12P48065 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SLC6A12P48065 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.14□□□□□ -1.59
SLC6A12P48065 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SLC6A12P48065 AC005294.1-201ENST00000355509 281 ntBASIC5.14□□□□□ -1.59
SLC6A12P48065 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.14□□□□□ -1.59
SLC6A12P48065 RNA5SP242-201ENST00000364171 118 ntBASIC5.14□□□□□ -1.59
SLC6A12P48065 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SLC6A12P48065 MIR589-201ENST00000385238 99 ntBASIC5.14□□□□□ -1.59
SLC6A12P48065 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SLC6A12P48065 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.14□□□□□ -1.59
SLC6A12P48065 AC079355.1-201ENST00000421770 223 ntBASIC5.14□□□□□ -1.59
SLC6A12P48065 Z85994.2-201ENST00000434327 452 ntBASIC5.14□□□□□ -1.59
SLC6A12P48065 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC5.14□□□□□ -1.59
SLC6A12P48065 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.14□□□□□ -1.59
SLC6A12P48065 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.14□□□□□ -1.59
SLC6A12P48065 CYCSP12-201ENST00000437729 300 ntBASIC5.14□□□□□ -1.59
SLC6A12P48065 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.14□□□□□ -1.59
SLC6A12P48065 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.14□□□□□ -1.59
SLC6A12P48065 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms