Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HOXA9P31269 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HOXA9P31269 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HOXA9P31269 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
HOXA9P31269 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.46□□□□□ -1.54
HOXA9P31269 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
HOXA9P31269 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
HOXA9P31269 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.46□□□□□ -1.54
HOXA9P31269 HSPA8P14-201ENST00000552265 1805 ntBASIC5.46□□□□□ -1.54
HOXA9P31269 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
HOXA9P31269 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
HOXA9P31269 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HOXA9P31269 AC006484.1-201ENST00000435086 1884 ntBASIC5.45□□□□□ -1.54
HOXA9P31269 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
HOXA9P31269 AC079298.1-201ENST00000625026 1619 ntBASIC5.45□□□□□ -1.54
HOXA9P31269 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
HOXA9P31269 OR9K1P-202ENST00000641111 3217 ntBASIC5.45□□□□□ -1.54
HOXA9P31269 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HOXA9P31269 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.45□□□□□ -1.54
HOXA9P31269 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HOXA9P31269 AC010266.2-201ENST00000564741 3255 ntBASIC5.45□□□□□ -1.54
HOXA9P31269 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HOXA9P31269 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.45□□□□□ -1.54
HOXA9P31269 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
HOXA9P31269 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
HOXA9P31269 RN7SKP185-201ENST00000362813 326 ntBASIC5.45□□□□□ -1.54
HOXA9P31269 RNVU1-6-201ENST00000364688 164 ntBASIC5.45□□□□□ -1.54
HOXA9P31269 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
HOXA9P31269 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HOXA9P31269 PEX12P1-201ENST00000400284 1048 ntBASIC5.45□□□□□ -1.54
HOXA9P31269 Z97832.1-201ENST00000402490 328 ntBASIC5.45□□□□□ -1.54
HOXA9P31269 RN7SKP114-201ENST00000410327 279 ntBASIC5.45□□□□□ -1.54
HOXA9P31269 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.45□□□□□ -1.54
HOXA9P31269 CHEK2P3-201ENST00000416118 248 ntBASIC5.45□□□□□ -1.54
HOXA9P31269 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.45□□□□□ -1.54
HOXA9P31269 OR2AM1P-201ENST00000422137 422 ntBASIC5.45□□□□□ -1.54
HOXA9P31269 AC245028.1-201ENST00000423259 256 ntBASIC5.45□□□□□ -1.54
HOXA9P31269 RPS27AP6-201ENST00000427962 448 ntBASIC5.45□□□□□ -1.54
HOXA9P31269 NPM1P18-201ENST00000434232 732 ntBASIC5.45□□□□□ -1.54
HOXA9P31269 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.45□□□□□ -1.54
HOXA9P31269 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HOXA9P31269 AC022133.1-201ENST00000490961 571 ntBASIC5.45□□□□□ -1.54
HOXA9P31269 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HOXA9P31269 AC111000.6-201ENST00000514471 709 ntBASIC5.45□□□□□ -1.54
HOXA9P31269 SNORA26.10-201ENST00000516427 141 ntBASIC5.45□□□□□ -1.54
HOXA9P31269 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.45□□□□□ -1.54
HOXA9P31269 OR7E128P-201ENST00000532736 1024 ntBASIC5.45□□□□□ -1.54
HOXA9P31269 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.45□□□□□ -1.54
HOXA9P31269 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HOXA9P31269 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.45□□□□□ -1.54
HOXA9P31269 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
HOXA9P31269 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.45□□□□□ -1.54
HOXA9P31269 AL589935.2-201ENST00000616471 1231 ntBASIC5.45□□□□□ -1.54
HOXA9P31269 AC010435.1-201ENST00000623353 1177 ntBASIC5.45□□□□□ -1.54
HOXA9P31269 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HOXA9P31269 AC005618.4-201ENST00000625053 554 ntBASIC5.45□□□□□ -1.54
HOXA9P31269 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
HOXA9P31269 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.45□□□□□ -1.54
HOXA9P31269 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HOXA9P31269 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HOXA9P31269 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.45□□□□□ -1.54
HOXA9P31269 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
HOXA9P31269 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HOXA9P31269 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HOXA9P31269 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HOXA9P31269 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.45□□□□□ -1.54
HOXA9P31269 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.45□□□□□ -1.54
HOXA9P31269 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HOXA9P31269 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HOXA9P31269 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HOXA9P31269 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
HOXA9P31269 CASC19-221ENST00000641309 1382 ntBASIC5.44□□□□□ -1.54
HOXA9P31269 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
HOXA9P31269 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.44□□□□□ -1.54
HOXA9P31269 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
HOXA9P31269 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HOXA9P31269 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HOXA9P31269 RN7SKP153-201ENST00000365026 316 ntBASIC5.44□□□□□ -1.54
HOXA9P31269 RNA5SP455-201ENST00000365190 119 ntBASIC5.44□□□□□ -1.54
HOXA9P31269 U3.28-201ENST00000391249 210 ntBASIC5.44□□□□□ -1.54
HOXA9P31269 AC136624.1-201ENST00000400791 413 ntBASIC5.44□□□□□ -1.54
HOXA9P31269 AP002530.1-201ENST00000405705 684 ntBASIC5.44□□□□□ -1.54
HOXA9P31269 AL807761.1-201ENST00000417622 171 ntBASIC5.44□□□□□ -1.54
HOXA9P31269 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.44□□□□□ -1.54
HOXA9P31269 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.44□□□□□ -1.54
HOXA9P31269 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.44□□□□□ -1.54
HOXA9P31269 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.44□□□□□ -1.54
HOXA9P31269 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.44□□□□□ -1.54
HOXA9P31269 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.44□□□□□ -1.54
HOXA9P31269 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.44□□□□□ -1.54
HOXA9P31269 snoU13.20-201ENST00000459180 104 ntBASIC5.44□□□□□ -1.54
HOXA9P31269 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC5.44□□□□□ -1.54
HOXA9P31269 AC140172.1-201ENST00000502928 141 ntBASIC5.44□□□□□ -1.54
HOXA9P31269 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.44□□□□□ -1.54
HOXA9P31269 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.44□□□□□ -1.54
HOXA9P31269 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.44□□□□□ -1.54
HOXA9P31269 COX6B1P5-201ENST00000509843 249 ntBASIC5.44□□□□□ -1.54
HOXA9P31269 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.44□□□□□ -1.54
HOXA9P31269 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HOXA9P31269 AC137768.1-201ENST00000549998 553 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms