Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 RPS24P8-201ENST00000431490 402 ntBASIC5.98□□□□□ -1.45
BDNFP23560 AC012075.1-201ENST00000436549 580 ntBASIC5.98□□□□□ -1.45
BDNFP23560 AC006335.2-201ENST00000437993 330 ntBASIC5.98□□□□□ -1.45
BDNFP23560 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.98□□□□□ -1.45
BDNFP23560 AL390119.1-201ENST00000440329 312 ntBASIC5.98□□□□□ -1.45
BDNFP23560 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.98□□□□□ -1.45
BDNFP23560 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.98□□□□□ -1.45
BDNFP23560 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.98□□□□□ -1.45
BDNFP23560 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC5.98□□□□□ -1.45
BDNFP23560 RPL12P39-201ENST00000455456 496 ntBASIC5.98□□□□□ -1.45
BDNFP23560 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.98□□□□□ -1.45
BDNFP23560 RPL5P22-201ENST00000480199 884 ntBASIC5.98□□□□□ -1.45
BDNFP23560 DUTP7-201ENST00000507982 486 ntBASIC5.98□□□□□ -1.45
BDNFP23560 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.98□□□□□ -1.45
BDNFP23560 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.98□□□□□ -1.45
BDNFP23560 RNU6-362P-201ENST00000516736 90 ntBASIC5.98□□□□□ -1.45
BDNFP23560 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
BDNFP23560 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.98□□□□□ -1.45
BDNFP23560 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
BDNFP23560 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.98□□□□□ -1.45
BDNFP23560 RBM22P12-201ENST00000567098 1255 ntBASIC5.98□□□□□ -1.45
BDNFP23560 AC010200.2-201ENST00000605098 235 ntBASIC5.98□□□□□ -1.45
BDNFP23560 AC015802.5-201ENST00000607478 399 ntBASIC5.98□□□□□ -1.45
BDNFP23560 AP000894.4-201ENST00000610185 483 ntBASIC5.98□□□□□ -1.45
BDNFP23560 AC104307.1-201ENST00000616142 196 ntBASIC5.98□□□□□ -1.45
BDNFP23560 AL035661.1-201ENST00000620459 1144 ntBASIC5.98□□□□□ -1.45
BDNFP23560 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.98□□□□□ -1.45
BDNFP23560 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
BDNFP23560 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.98□□□□□ -1.45
BDNFP23560 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
BDNFP23560 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
BDNFP23560 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
BDNFP23560 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
BDNFP23560 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.98□□□□□ -1.45
BDNFP23560 AL359955.1-201ENST00000455242 3275 ntBASIC5.98□□□□□ -1.45
BDNFP23560 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.98□□□□□ -1.45
BDNFP23560 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
BDNFP23560 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.98□□□□□ -1.45
BDNFP23560 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
BDNFP23560 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
BDNFP23560 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
BDNFP23560 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.98□□□□□ -1.45
BDNFP23560 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.98□□□□□ -1.45
BDNFP23560 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.98□□□□□ -1.45
BDNFP23560 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
BDNFP23560 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
BDNFP23560 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
BDNFP23560 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
BDNFP23560 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
BDNFP23560 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
BDNFP23560 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.97□□□□□ -1.45
BDNFP23560 AC018809.2-201ENST00000602436 3823 ntBASIC5.97□□□□□ -1.45
BDNFP23560 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
BDNFP23560 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
BDNFP23560 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.97□□□□□ -1.45
BDNFP23560 SNORD115-48-201ENST00000364764 76 ntBASIC5.97□□□□□ -1.45
BDNFP23560 RNA5SP223-201ENST00000365174 120 ntBASIC5.97□□□□□ -1.45
BDNFP23560 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
BDNFP23560 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
BDNFP23560 MIR143-201ENST00000385300 106 ntBASIC5.97□□□□□ -1.45
BDNFP23560 RNU6-244P-201ENST00000391028 104 ntBASIC5.97□□□□□ -1.45
BDNFP23560 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.97□□□□□ -1.45
BDNFP23560 OR3A2-201ENST00000408891 1076 ntBASIC5.97□□□□□ -1.45
BDNFP23560 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.97□□□□□ -1.45
BDNFP23560 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.97□□□□□ -1.45
BDNFP23560 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.97□□□□□ -1.45
BDNFP23560 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.97□□□□□ -1.45
BDNFP23560 AC009965.2-201ENST00000425328 970 ntBASIC5.97□□□□□ -1.45
BDNFP23560 AC092651.1-201ENST00000426110 312 ntBASIC5.97□□□□□ -1.45
BDNFP23560 AL450263.2-201ENST00000439400 589 ntBASIC5.97□□□□□ -1.45
BDNFP23560 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.97□□□□□ -1.45
BDNFP23560 RPS7P6-201ENST00000485777 579 ntBASIC5.97□□□□□ -1.45
BDNFP23560 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.97□□□□□ -1.45
BDNFP23560 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
BDNFP23560 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.97□□□□□ -1.45
BDNFP23560 IGLV3-24-201ENST00000517477 197 ntBASIC5.97□□□□□ -1.45
BDNFP23560 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.97□□□□□ -1.45
BDNFP23560 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.97□□□□□ -1.45
BDNFP23560 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
BDNFP23560 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.97□□□□□ -1.45
BDNFP23560 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
BDNFP23560 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
BDNFP23560 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.97□□□□□ -1.45
BDNFP23560 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.97□□□□□ -1.45
BDNFP23560 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.97□□□□□ -1.45
BDNFP23560 CR589904.2-201ENST00000612533 440 ntBASIC5.97□□□□□ -1.45
BDNFP23560 AL139407.1-201ENST00000613826 1175 ntBASIC5.97□□□□□ -1.45
BDNFP23560 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
BDNFP23560 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.97□□□□□ -1.45
BDNFP23560 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
BDNFP23560 MAPK10-304ENST00000641341 3984 ntBASIC5.97□□□□□ -1.45
BDNFP23560 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
BDNFP23560 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
BDNFP23560 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.97□□□□□ -1.45
BDNFP23560 AC004158.1-201ENST00000564508 4319 ntBASIC5.97□□□□□ -1.45
BDNFP23560 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.97□□□□□ -1.45
BDNFP23560 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
BDNFP23560 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
BDNFP23560 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
BDNFP23560 AC114546.3-201ENST00000623582 1734 ntBASIC5.96□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms