Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AC074141.1-201ENST00000588129 2995 ntBASIC7.31□□□□□ -1.24
LIG1P18858 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
LIG1P18858 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
LIG1P18858 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC7.31□□□□□ -1.24
LIG1P18858 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
LIG1P18858 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
LIG1P18858 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC7.3□□□□□ -1.24
LIG1P18858 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
LIG1P18858 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC7.3□□□□□ -1.24
LIG1P18858 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
LIG1P18858 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
LIG1P18858 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC7.3□□□□□ -1.24
LIG1P18858 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
LIG1P18858 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
LIG1P18858 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
LIG1P18858 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
LIG1P18858 Y_RNA.6-201ENST00000362350 114 ntBASIC7.3□□□□□ -1.24
LIG1P18858 SNORA64.3-201ENST00000365647 134 ntBASIC7.3□□□□□ -1.24
LIG1P18858 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
LIG1P18858 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
LIG1P18858 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
LIG1P18858 AC098592.2-201ENST00000413158 265 ntBASIC7.3□□□□□ -1.24
LIG1P18858 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC7.3□□□□□ -1.24
LIG1P18858 AL034379.1-201ENST00000423216 253 ntBASIC7.3□□□□□ -1.24
LIG1P18858 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC7.3□□□□□ -1.24
LIG1P18858 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC7.3□□□□□ -1.24
LIG1P18858 RAB9AP5-201ENST00000437794 597 ntBASIC7.3□□□□□ -1.24
LIG1P18858 AC245291.3-201ENST00000443400 292 ntBASIC7.3□□□□□ -1.24
LIG1P18858 RAB9AP2-201ENST00000443911 597 ntBASIC7.3□□□□□ -1.24
LIG1P18858 MTCYBP42-201ENST00000444653 1130 ntBASIC7.3□□□□□ -1.24
LIG1P18858 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC7.3□□□□□ -1.24
LIG1P18858 MTCYBP3-201ENST00000445588 1137 ntBASIC7.3□□□□□ -1.24
LIG1P18858 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC7.3□□□□□ -1.24
LIG1P18858 AL359385.1-201ENST00000456509 365 ntBASIC7.3□□□□□ -1.24
LIG1P18858 CST12P-201ENST00000457644 362 ntBASIC7.3□□□□□ -1.24
LIG1P18858 AC084754.1-201ENST00000463466 464 ntBASIC7.3□□□□□ -1.24
LIG1P18858 MARK2P8-201ENST00000476069 952 ntBASIC7.3□□□□□ -1.24
LIG1P18858 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC7.3□□□□□ -1.24
LIG1P18858 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC7.3□□□□□ -1.24
LIG1P18858 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC7.3□□□□□ -1.24
LIG1P18858 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC7.3□□□□□ -1.24
LIG1P18858 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC7.3□□□□□ -1.24
LIG1P18858 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC7.3□□□□□ -1.24
LIG1P18858 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC7.3□□□□□ -1.24
LIG1P18858 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC7.3□□□□□ -1.24
LIG1P18858 AC092851.1-201ENST00000535964 478 ntBASIC7.3□□□□□ -1.24
LIG1P18858 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
LIG1P18858 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC7.3□□□□□ -1.24
LIG1P18858 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC7.3□□□□□ -1.24
LIG1P18858 AC011611.5-201ENST00000552477 578 ntBASIC7.3□□□□□ -1.24
LIG1P18858 AL133241.1-201ENST00000556832 487 ntBASIC7.3□□□□□ -1.24
LIG1P18858 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC7.3□□□□□ -1.24
LIG1P18858 AC234778.2-201ENST00000566241 354 ntBASIC7.3□□□□□ -1.24
LIG1P18858 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC7.3□□□□□ -1.24
LIG1P18858 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC7.3□□□□□ -1.24
LIG1P18858 AC093635.1-201ENST00000609028 555 ntBASIC7.3□□□□□ -1.24
LIG1P18858 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC7.3□□□□□ -1.24
LIG1P18858 AC015819.1-201ENST00000613588 663 ntBASIC7.3□□□□□ -1.24
LIG1P18858 U1.41-201ENST00000617626 165 ntBASIC7.3□□□□□ -1.24
LIG1P18858 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
LIG1P18858 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
LIG1P18858 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC7.3□□□□□ -1.24
LIG1P18858 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
LIG1P18858 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC7.3□□□□□ -1.24
LIG1P18858 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
LIG1P18858 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
LIG1P18858 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC7.3□□□□□ -1.24
LIG1P18858 AC006042.3-201ENST00000454684 1469 ntBASIC7.3□□□□□ -1.24
LIG1P18858 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC7.3□□□□□ -1.24
LIG1P18858 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC7.29□□□□□ -1.24
LIG1P18858 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
LIG1P18858 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
LIG1P18858 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
LIG1P18858 CDC27P2-201ENST00000425026 1922 ntBASIC7.29□□□□□ -1.24
LIG1P18858 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC7.29□□□□□ -1.24
LIG1P18858 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
LIG1P18858 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
LIG1P18858 RNA5SP85-201ENST00000365378 119 ntBASIC7.29□□□□□ -1.24
LIG1P18858 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC7.29□□□□□ -1.24
LIG1P18858 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC7.29□□□□□ -1.24
LIG1P18858 TINAG-202ENST00000370864 692 ntTSL 2 BASIC7.29□□□□□ -1.24
LIG1P18858 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
LIG1P18858 RNU6-157P-201ENST00000383957 107 ntBASIC7.29□□□□□ -1.24
LIG1P18858 SNORA70.9-201ENST00000384370 135 ntBASIC7.29□□□□□ -1.24
LIG1P18858 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC7.29□□□□□ -1.24
LIG1P18858 GSTA12P-201ENST00000402398 508 ntBASIC7.29□□□□□ -1.24
LIG1P18858 XKRYP4-201ENST00000414395 483 ntBASIC7.29□□□□□ -1.24
LIG1P18858 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC7.29□□□□□ -1.24
LIG1P18858 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC7.29□□□□□ -1.24
LIG1P18858 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
LIG1P18858 FAM183DP-201ENST00000421987 399 ntBASIC7.29□□□□□ -1.24
LIG1P18858 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC7.29□□□□□ -1.24
LIG1P18858 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC7.29□□□□□ -1.24
LIG1P18858 GTF2IP14-201ENST00000441415 586 ntBASIC7.29□□□□□ -1.24
LIG1P18858 AC016908.1-201ENST00000442571 1219 ntBASIC7.29□□□□□ -1.24
LIG1P18858 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC7.29□□□□□ -1.24
LIG1P18858 AC234771.2-201ENST00000445718 597 ntBASIC7.29□□□□□ -1.24
LIG1P18858 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC7.29□□□□□ -1.24
LIG1P18858 XKRYP5-201ENST00000449659 483 ntBASIC7.29□□□□□ -1.24
LIG1P18858 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms