Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PTPN1P18031 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PTPN1P18031 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PTPN1P18031 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PTPN1P18031 RNU4-72P-201ENST00000410754 173 ntBASIC6.39□□□□□ -1.39
PTPN1P18031 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC6.39□□□□□ -1.39
PTPN1P18031 RAP1BP1-201ENST00000412709 553 ntBASIC6.39□□□□□ -1.39
PTPN1P18031 AL031779.1-201ENST00000415663 330 ntBASIC6.39□□□□□ -1.39
PTPN1P18031 RPS26P13-201ENST00000419030 330 ntBASIC6.39□□□□□ -1.39
PTPN1P18031 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC6.39□□□□□ -1.39
PTPN1P18031 AC245884.2-201ENST00000426257 404 ntBASIC6.39□□□□□ -1.39
PTPN1P18031 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.39□□□□□ -1.39
PTPN1P18031 HSFY3P-201ENST00000444242 1191 ntBASIC6.39□□□□□ -1.39
PTPN1P18031 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC6.39□□□□□ -1.39
PTPN1P18031 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PTPN1P18031 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC6.39□□□□□ -1.39
PTPN1P18031 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC6.39□□□□□ -1.39
PTPN1P18031 AC128716.1-201ENST00000475129 166 ntBASIC6.39□□□□□ -1.39
PTPN1P18031 RPL23AP40-201ENST00000487630 390 ntBASIC6.39□□□□□ -1.39
PTPN1P18031 AC023050.1-201ENST00000498198 304 ntBASIC6.39□□□□□ -1.39
PTPN1P18031 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC6.39□□□□□ -1.39
PTPN1P18031 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.39□□□□□ -1.39
PTPN1P18031 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC6.39□□□□□ -1.39
PTPN1P18031 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.39□□□□□ -1.39
PTPN1P18031 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
PTPN1P18031 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PTPN1P18031 AP003080.1-202ENST00000526526 915 ntBASIC6.39□□□□□ -1.39
PTPN1P18031 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC6.39□□□□□ -1.39
PTPN1P18031 NANOGNBP2-201ENST00000544753 553 ntBASIC6.39□□□□□ -1.39
PTPN1P18031 AC090695.1-201ENST00000561269 1222 ntBASIC6.39□□□□□ -1.39
PTPN1P18031 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.39□□□□□ -1.39
PTPN1P18031 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.39□□□□□ -1.39
PTPN1P18031 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC6.39□□□□□ -1.39
PTPN1P18031 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.39□□□□□ -1.39
PTPN1P18031 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.39□□□□□ -1.39
PTPN1P18031 AC012254.3-201ENST00000591183 2117 ntBASIC6.39□□□□□ -1.39
PTPN1P18031 HULC.1-201ENST00000612720 240 ntBASIC6.39□□□□□ -1.39
PTPN1P18031 MIR6861-201ENST00000618657 64 ntBASIC6.39□□□□□ -1.39
PTPN1P18031 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC6.39□□□□□ -1.39
PTPN1P18031 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.39□□□□□ -1.39
PTPN1P18031 AC007671.2-201ENST00000637344 619 ntBASIC6.39□□□□□ -1.39
PTPN1P18031 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
PTPN1P18031 TTC41P-205ENST00000551270 3963 ntBASIC6.39□□□□□ -1.39
PTPN1P18031 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
PTPN1P18031 AC005261.4-201ENST00000600047 1385 ntBASIC6.39□□□□□ -1.39
PTPN1P18031 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
PTPN1P18031 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC6.39□□□□□ -1.39
PTPN1P18031 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PTPN1P18031 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PTPN1P18031 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PTPN1P18031 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.39□□□□□ -1.39
PTPN1P18031 YES1P1-201ENST00000418510 1628 ntBASIC6.39□□□□□ -1.39
PTPN1P18031 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC6.39□□□□□ -1.39
PTPN1P18031 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PTPN1P18031 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
PTPN1P18031 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
PTPN1P18031 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PTPN1P18031 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
PTPN1P18031 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PTPN1P18031 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PTPN1P18031 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PTPN1P18031 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.38□□□□□ -1.39
PTPN1P18031 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
PTPN1P18031 RN7SKP149-201ENST00000363008 344 ntBASIC6.38□□□□□ -1.39
PTPN1P18031 FIG4-202ENST00000368941 791 ntTSL 3 BASIC6.38□□□□□ -1.39
PTPN1P18031 AL356968.2-201ENST00000412769 1257 ntBASIC6.38□□□□□ -1.39
PTPN1P18031 RPS7P9-201ENST00000414704 586 ntBASIC6.38□□□□□ -1.39
PTPN1P18031 USP9YP26-201ENST00000421008 661 ntBASIC6.38□□□□□ -1.39
PTPN1P18031 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC6.38□□□□□ -1.39
PTPN1P18031 NMD3P2-201ENST00000421815 761 ntBASIC6.38□□□□□ -1.39
PTPN1P18031 GTF2IP2-201ENST00000424290 697 ntBASIC6.38□□□□□ -1.39
PTPN1P18031 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC6.38□□□□□ -1.39
PTPN1P18031 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.38□□□□□ -1.39
PTPN1P18031 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC6.38□□□□□ -1.39
PTPN1P18031 AC090018.1-201ENST00000434369 367 ntBASIC6.38□□□□□ -1.39
PTPN1P18031 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC6.38□□□□□ -1.39
PTPN1P18031 ARL4AP3-201ENST00000441452 574 ntBASIC6.38□□□□□ -1.39
PTPN1P18031 AL157827.1-201ENST00000447622 132 ntBASIC6.38□□□□□ -1.39
PTPN1P18031 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.38□□□□□ -1.39
PTPN1P18031 AC244505.3-201ENST00000454598 187 ntBASIC6.38□□□□□ -1.39
PTPN1P18031 RPL5P13-201ENST00000462840 709 ntBASIC6.38□□□□□ -1.39
PTPN1P18031 AC094085.1-201ENST00000468914 584 ntBASIC6.38□□□□□ -1.39
PTPN1P18031 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.38□□□□□ -1.39
PTPN1P18031 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC6.38□□□□□ -1.39
PTPN1P18031 CCDC11P1-201ENST00000503137 1162 ntBASIC6.38□□□□□ -1.39
PTPN1P18031 RPF2P2-201ENST00000504693 896 ntBASIC6.38□□□□□ -1.39
PTPN1P18031 MTND4P2-201ENST00000507767 1203 ntBASIC6.38□□□□□ -1.39
PTPN1P18031 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC6.38□□□□□ -1.39
PTPN1P18031 Y_RNA.667-201ENST00000516212 107 ntBASIC6.38□□□□□ -1.39
PTPN1P18031 RNA5SP438-201ENST00000516561 112 ntBASIC6.38□□□□□ -1.39
PTPN1P18031 RNU5A-4P-201ENST00000516588 111 ntBASIC6.38□□□□□ -1.39
PTPN1P18031 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC6.38□□□□□ -1.39
PTPN1P18031 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.38□□□□□ -1.39
PTPN1P18031 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC6.38□□□□□ -1.39
PTPN1P18031 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.38□□□□□ -1.39
PTPN1P18031 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PTPN1P18031 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC6.38□□□□□ -1.39
PTPN1P18031 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC6.38□□□□□ -1.39
PTPN1P18031 AC007494.1-201ENST00000562293 760 ntBASIC6.38□□□□□ -1.39
PTPN1P18031 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms