Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
PDGFRAP16234 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
PDGFRAP16234 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.62□□□□□ -1.51
PDGFRAP16234 AC087565.3-202ENST00000642085 1603 ntBASIC5.62□□□□□ -1.51
PDGFRAP16234 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PDGFRAP16234 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
PDGFRAP16234 ADAM24P-201ENST00000398655 2101 ntBASIC5.62□□□□□ -1.51
PDGFRAP16234 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.62□□□□□ -1.51
PDGFRAP16234 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PDGFRAP16234 AC109446.4-201ENST00000623235 2755 ntBASIC5.61□□□□□ -1.51
PDGFRAP16234 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDGFRAP16234 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
PDGFRAP16234 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
PDGFRAP16234 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDGFRAP16234 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDGFRAP16234 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PDGFRAP16234 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.61□□□□□ -1.51
PDGFRAP16234 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PDGFRAP16234 RNU1-19P-201ENST00000363306 165 ntBASIC5.61□□□□□ -1.51
PDGFRAP16234 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
PDGFRAP16234 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.61□□□□□ -1.51
PDGFRAP16234 GAPDHP15-201ENST00000398586 975 ntBASIC5.61□□□□□ -1.51
PDGFRAP16234 HSPA8P15-201ENST00000401676 786 ntBASIC5.61□□□□□ -1.51
PDGFRAP16234 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
PDGFRAP16234 OR4K12P-201ENST00000406538 961 ntBASIC5.61□□□□□ -1.51
PDGFRAP16234 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.61□□□□□ -1.51
PDGFRAP16234 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.61□□□□□ -1.51
PDGFRAP16234 AL355433.1-201ENST00000422804 300 ntBASIC5.61□□□□□ -1.51
PDGFRAP16234 DSTNP5-201ENST00000427921 523 ntBASIC5.61□□□□□ -1.51
PDGFRAP16234 RPL7AP49-201ENST00000429522 581 ntBASIC5.61□□□□□ -1.51
PDGFRAP16234 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.61□□□□□ -1.51
PDGFRAP16234 AL591438.1-201ENST00000433508 581 ntBASIC5.61□□□□□ -1.51
PDGFRAP16234 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.61□□□□□ -1.51
PDGFRAP16234 AC016772.1-201ENST00000444170 1261 ntBASIC5.61□□□□□ -1.51
PDGFRAP16234 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
PDGFRAP16234 OR2AO1P-201ENST00000476497 403 ntBASIC5.61□□□□□ -1.51
PDGFRAP16234 RPS4XP1-201ENST00000482189 787 ntBASIC5.61□□□□□ -1.51
PDGFRAP16234 AC058823.1-201ENST00000485315 474 ntBASIC5.61□□□□□ -1.51
PDGFRAP16234 RPS4XP14-201ENST00000493072 781 ntBASIC5.61□□□□□ -1.51
PDGFRAP16234 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.61□□□□□ -1.51
PDGFRAP16234 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.61□□□□□ -1.51
PDGFRAP16234 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.61□□□□□ -1.51
PDGFRAP16234 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.61□□□□□ -1.51
PDGFRAP16234 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
PDGFRAP16234 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.61□□□□□ -1.51
PDGFRAP16234 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.61□□□□□ -1.51
PDGFRAP16234 SMG1P7-201ENST00000565246 2704 ntBASIC5.61□□□□□ -1.51
PDGFRAP16234 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
PDGFRAP16234 RBM22P1-201ENST00000578589 1214 ntBASIC5.61□□□□□ -1.51
PDGFRAP16234 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.61□□□□□ -1.51
PDGFRAP16234 AL592494.3-201ENST00000609485 464 ntBASIC5.61□□□□□ -1.51
PDGFRAP16234 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.61□□□□□ -1.51
PDGFRAP16234 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.61□□□□□ -1.51
PDGFRAP16234 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.61□□□□□ -1.51
PDGFRAP16234 CASC19-264ENST00000641912 1184 ntBASIC5.61□□□□□ -1.51
PDGFRAP16234 AC026523.2-201ENST00000625039 7739 ntBASIC5.61□□□□□ -1.51
PDGFRAP16234 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDGFRAP16234 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.61□□□□□ -1.51
PDGFRAP16234 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PDGFRAP16234 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
PDGFRAP16234 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
PDGFRAP16234 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
PDGFRAP16234 AP001029.2-203ENST00000589795 4910 ntBASIC5.6□□□□□ -1.51
PDGFRAP16234 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PDGFRAP16234 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
PDGFRAP16234 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PDGFRAP16234 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
PDGFRAP16234 RNA5SP241-201ENST00000391326 114 ntBASIC5.6□□□□□ -1.51
PDGFRAP16234 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.6□□□□□ -1.51
PDGFRAP16234 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PDGFRAP16234 BX510359.3-201ENST00000422168 306 ntBASIC5.6□□□□□ -1.51
PDGFRAP16234 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.6□□□□□ -1.51
PDGFRAP16234 VTI1BP4-201ENST00000427516 527 ntBASIC5.6□□□□□ -1.51
PDGFRAP16234 RPL7L1P9-201ENST00000431298 745 ntBASIC5.6□□□□□ -1.51
PDGFRAP16234 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.6□□□□□ -1.51
PDGFRAP16234 RN7SL214P-201ENST00000487317 265 ntBASIC5.6□□□□□ -1.51
PDGFRAP16234 RPEP1-201ENST00000504507 658 ntBASIC5.6□□□□□ -1.51
PDGFRAP16234 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.6□□□□□ -1.51
PDGFRAP16234 SEC11B-201ENST00000518383 499 ntBASIC5.6□□□□□ -1.51
PDGFRAP16234 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.6□□□□□ -1.51
PDGFRAP16234 HMGB1P40-201ENST00000525121 540 ntBASIC5.6□□□□□ -1.51
PDGFRAP16234 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.6□□□□□ -1.51
PDGFRAP16234 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PDGFRAP16234 DUX4L52-201ENST00000549363 777 ntBASIC5.6□□□□□ -1.51
PDGFRAP16234 MEG8-217ENST00000556637 924 ntTSL 5 BASIC5.6□□□□□ -1.51
PDGFRAP16234 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.6□□□□□ -1.51
PDGFRAP16234 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.6□□□□□ -1.51
PDGFRAP16234 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.6□□□□□ -1.51
PDGFRAP16234 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.6□□□□□ -1.51
PDGFRAP16234 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PDGFRAP16234 MIR6837-201ENST00000620884 64 ntBASIC5.6□□□□□ -1.51
PDGFRAP16234 SAMMSON-209ENST00000641222 1100 ntBASIC5.6□□□□□ -1.51
PDGFRAP16234 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
PDGFRAP16234 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
PDGFRAP16234 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PDGFRAP16234 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.6□□□□□ -1.51
PDGFRAP16234 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.6□□□□□ -1.51
PDGFRAP16234 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
PDGFRAP16234 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
PDGFRAP16234 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms