Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 RN7SKP276-201ENST00000516242 268 ntBASIC5.7□□□□□ -1.5
COL11A1P12107 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL11A1P12107 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COL11A1P12107 RN7SL290P-201ENST00000578661 300 ntBASIC5.7□□□□□ -1.5
COL11A1P12107 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.7□□□□□ -1.5
COL11A1P12107 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC5.7□□□□□ -1.5
COL11A1P12107 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.7□□□□□ -1.5
COL11A1P12107 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.7□□□□□ -1.5
COL11A1P12107 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.7□□□□□ -1.5
COL11A1P12107 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
COL11A1P12107 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
COL11A1P12107 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.7□□□□□ -1.5
COL11A1P12107 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL11A1P12107 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.7□□□□□ -1.5
COL11A1P12107 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COL11A1P12107 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
COL11A1P12107 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.7□□□□□ -1.5
COL11A1P12107 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COL11A1P12107 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.7□□□□□ -1.5
COL11A1P12107 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.69□□□□□ -1.5
COL11A1P12107 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COL11A1P12107 MIR589-201ENST00000385238 99 ntBASIC5.69□□□□□ -1.5
COL11A1P12107 AL359265.1-201ENST00000440296 795 ntBASIC5.69□□□□□ -1.5
COL11A1P12107 AL356390.1-201ENST00000455684 397 ntBASIC5.69□□□□□ -1.5
COL11A1P12107 AC116562.1-201ENST00000485355 781 ntBASIC5.69□□□□□ -1.5
COL11A1P12107 AC013356.1-201ENST00000489027 564 ntBASIC5.69□□□□□ -1.5
COL11A1P12107 AC022133.1-201ENST00000490961 571 ntBASIC5.69□□□□□ -1.5
COL11A1P12107 AC104971.1-201ENST00000495117 578 ntBASIC5.69□□□□□ -1.5
COL11A1P12107 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.69□□□□□ -1.5
COL11A1P12107 AC022360.1-201ENST00000521058 340 ntBASIC5.69□□□□□ -1.5
COL11A1P12107 AC027369.5-201ENST00000533838 755 ntBASIC5.69□□□□□ -1.5
COL11A1P12107 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.69□□□□□ -1.5
COL11A1P12107 AC026367.3-201ENST00000619032 590 ntBASIC5.69□□□□□ -1.5
COL11A1P12107 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.69□□□□□ -1.5
COL11A1P12107 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL11A1P12107 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL11A1P12107 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC5.69□□□□□ -1.5
COL11A1P12107 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
COL11A1P12107 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.69□□□□□ -1.5
COL11A1P12107 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL11A1P12107 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.69□□□□□ -1.5
COL11A1P12107 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL11A1P12107 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC5.69□□□□□ -1.5
COL11A1P12107 RNU1-32P-201ENST00000363937 159 ntBASIC5.69□□□□□ -1.5
COL11A1P12107 RNU6-398P-201ENST00000384143 109 ntBASIC5.69□□□□□ -1.5
COL11A1P12107 RN7SKP106-201ENST00000410832 272 ntBASIC5.69□□□□□ -1.5
COL11A1P12107 NRBF2P3-201ENST00000432731 865 ntBASIC5.69□□□□□ -1.5
COL11A1P12107 AC073052.1-201ENST00000440417 714 ntBASIC5.69□□□□□ -1.5
COL11A1P12107 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.69□□□□□ -1.5
COL11A1P12107 RPL12P20-201ENST00000475538 479 ntBASIC5.69□□□□□ -1.5
COL11A1P12107 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.69□□□□□ -1.5
COL11A1P12107 OR8G5-201ENST00000524943 1041 ntBASIC5.69□□□□□ -1.5
COL11A1P12107 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COL11A1P12107 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC5.69□□□□□ -1.5
COL11A1P12107 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.69□□□□□ -1.5
COL11A1P12107 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COL11A1P12107 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL11A1P12107 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.68□□□□□ -1.5
COL11A1P12107 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.68□□□□□ -1.5
COL11A1P12107 AL356317.1-201ENST00000396110 1436 ntBASIC5.68□□□□□ -1.5
COL11A1P12107 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL11A1P12107 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC5.68□□□□□ -1.5
COL11A1P12107 DNM1P47-203ENST00000571780 12667 ntBASIC5.68□□□□□ -1.5
COL11A1P12107 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL11A1P12107 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL11A1P12107 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.68□□□□□ -1.5
COL11A1P12107 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.68□□□□□ -1.5
COL11A1P12107 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.68□□□□□ -1.5
COL11A1P12107 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
COL11A1P12107 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.68□□□□□ -1.5
COL11A1P12107 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.68□□□□□ -1.5
COL11A1P12107 AC093388.1-201ENST00000609166 430 ntBASIC5.68□□□□□ -1.5
COL11A1P12107 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL11A1P12107 AC009704.2-201ENST00000618739 483 ntBASIC5.68□□□□□ -1.5
COL11A1P12107 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL11A1P12107 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL11A1P12107 AL117339.4-201ENST00000608335 7063 ntBASIC5.68□□□□□ -1.5
COL11A1P12107 NCLP2-201ENST00000416078 1462 ntBASIC5.68□□□□□ -1.5
COL11A1P12107 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.67□□□□□ -1.5
COL11A1P12107 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL11A1P12107 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
COL11A1P12107 OR1L6-202ENST00000373684 1044 ntBASIC5.67□□□□□ -1.5
COL11A1P12107 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.67□□□□□ -1.5
COL11A1P12107 AL356981.1-201ENST00000454879 684 ntBASIC5.67□□□□□ -1.5
COL11A1P12107 RN7SL385P-201ENST00000468873 276 ntBASIC5.67□□□□□ -1.5
COL11A1P12107 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.67□□□□□ -1.5
COL11A1P12107 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
COL11A1P12107 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.67□□□□□ -1.5
COL11A1P12107 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.67□□□□□ -1.5
COL11A1P12107 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.67□□□□□ -1.5
COL11A1P12107 OR5M2P-201ENST00000529003 936 ntBASIC5.67□□□□□ -1.5
COL11A1P12107 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.67□□□□□ -1.5
COL11A1P12107 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.67□□□□□ -1.5
COL11A1P12107 BGLT3-201ENST00000564523 994 ntBASIC5.67□□□□□ -1.5
COL11A1P12107 ATP5J2P6-201ENST00000565203 266 ntBASIC5.67□□□□□ -1.5
COL11A1P12107 AC020910.2-201ENST00000603635 610 ntBASIC5.67□□□□□ -1.5
COL11A1P12107 AL138960.1-201ENST00000613838 513 ntBASIC5.67□□□□□ -1.5
COL11A1P12107 AL162574.1-201ENST00000615702 950 ntBASIC5.67□□□□□ -1.5
COL11A1P12107 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.67□□□□□ -1.5
COL11A1P12107 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms