Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 MIR323A-201ENST00000362199 86 ntBASIC5.38□□□□□ -1.55
CD48P09326 RNU4-23P-201ENST00000362839 140 ntBASIC5.38□□□□□ -1.55
CD48P09326 RN7SKP160-201ENST00000363804 340 ntBASIC5.38□□□□□ -1.55
CD48P09326 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CD48P09326 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CD48P09326 RPL21P67-201ENST00000402896 478 ntBASIC5.38□□□□□ -1.55
CD48P09326 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.38□□□□□ -1.55
CD48P09326 TRIM60P13-201ENST00000432350 1283 ntBASIC5.38□□□□□ -1.55
CD48P09326 GAPDHP58-201ENST00000438477 1006 ntBASIC5.38□□□□□ -1.55
CD48P09326 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.38□□□□□ -1.55
CD48P09326 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.38□□□□□ -1.55
CD48P09326 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.38□□□□□ -1.55
CD48P09326 BX842559.2-201ENST00000451418 605 ntBASIC5.38□□□□□ -1.55
CD48P09326 AGGF1P3-201ENST00000493675 1213 ntBASIC5.38□□□□□ -1.55
CD48P09326 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.38□□□□□ -1.55
CD48P09326 RPS4XP20-201ENST00000505751 772 ntBASIC5.38□□□□□ -1.55
CD48P09326 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.38□□□□□ -1.55
CD48P09326 SNORD116-30-201ENST00000516468 85 ntBASIC5.38□□□□□ -1.55
CD48P09326 RNU4-18P-201ENST00000516751 149 ntBASIC5.38□□□□□ -1.55
CD48P09326 RNU6-467P-201ENST00000517027 110 ntBASIC5.38□□□□□ -1.55
CD48P09326 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.38□□□□□ -1.55
CD48P09326 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CD48P09326 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.38□□□□□ -1.55
CD48P09326 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.38□□□□□ -1.55
CD48P09326 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CD48P09326 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CD48P09326 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.38□□□□□ -1.55
CD48P09326 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CD48P09326 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CD48P09326 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.38□□□□□ -1.55
CD48P09326 AC012146.2-201ENST00000576545 416 ntBASIC5.38□□□□□ -1.55
CD48P09326 BNIP3P35-201ENST00000604530 490 ntBASIC5.38□□□□□ -1.55
CD48P09326 AP005432.2-201ENST00000608162 586 ntBASIC5.38□□□□□ -1.55
CD48P09326 AC108359.1-201ENST00000616451 1211 ntBASIC5.38□□□□□ -1.55
CD48P09326 WBP1LP8-201ENST00000617401 327 ntBASIC5.38□□□□□ -1.55
CD48P09326 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.38□□□□□ -1.55
CD48P09326 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.38□□□□□ -1.55
CD48P09326 AL391262.2-201ENST00000622466 494 ntBASIC5.38□□□□□ -1.55
CD48P09326 AC020923.1-201ENST00000624021 917 ntBASIC5.38□□□□□ -1.55
CD48P09326 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CD48P09326 AC074101.1-201ENST00000637861 241 ntBASIC5.38□□□□□ -1.55
CD48P09326 TET1P1-201ENST00000426627 2301 ntBASIC5.38□□□□□ -1.55
CD48P09326 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CD48P09326 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
CD48P09326 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CD48P09326 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CD48P09326 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
CD48P09326 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CD48P09326 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
CD48P09326 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CD48P09326 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CD48P09326 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.37□□□□□ -1.55
CD48P09326 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.37□□□□□ -1.55
CD48P09326 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.37□□□□□ -1.55
CD48P09326 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CD48P09326 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.37□□□□□ -1.55
CD48P09326 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CD48P09326 RN7SKP74-201ENST00000362849 309 ntBASIC5.37□□□□□ -1.55
CD48P09326 RN7SKP162-201ENST00000363605 345 ntBASIC5.37□□□□□ -1.55
CD48P09326 SNORA67-201ENST00000384423 137 ntBASIC5.37□□□□□ -1.55
CD48P09326 OR8V1P-201ENST00000395193 873 ntBASIC5.37□□□□□ -1.55
CD48P09326 U3.32-201ENST00000408116 212 ntBASIC5.37□□□□□ -1.55
CD48P09326 RPS11P7-201ENST00000442125 465 ntBASIC5.37□□□□□ -1.55
CD48P09326 RPL7AP61-201ENST00000443410 636 ntBASIC5.37□□□□□ -1.55
CD48P09326 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.37□□□□□ -1.55
CD48P09326 MTND3P4-201ENST00000453537 303 ntBASIC5.37□□□□□ -1.55
CD48P09326 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.37□□□□□ -1.55
CD48P09326 TPRKBP1-201ENST00000456243 481 ntBASIC5.37□□□□□ -1.55
CD48P09326 AC089999.1-201ENST00000460336 374 ntBASIC5.37□□□□□ -1.55
CD48P09326 AC020779.1-201ENST00000478757 796 ntBASIC5.37□□□□□ -1.55
CD48P09326 AC097173.1-201ENST00000505862 819 ntBASIC5.37□□□□□ -1.55
CD48P09326 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.37□□□□□ -1.55
CD48P09326 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC5.37□□□□□ -1.55
CD48P09326 OR8A2P-201ENST00000528631 952 ntBASIC5.37□□□□□ -1.55
CD48P09326 AC134349.2-201ENST00000535136 910 ntBASIC5.37□□□□□ -1.55
CD48P09326 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.37□□□□□ -1.55
CD48P09326 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CD48P09326 MIR3936-201ENST00000584304 110 ntBASIC5.37□□□□□ -1.55
CD48P09326 AP005131.7-201ENST00000610087 611 ntBASIC5.37□□□□□ -1.55
CD48P09326 BNIP3P41-202ENST00000616656 861 ntBASIC5.37□□□□□ -1.55
CD48P09326 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
CD48P09326 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CD48P09326 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CD48P09326 AC104260.2-201ENST00000623551 3497 ntBASIC5.37□□□□□ -1.55
CD48P09326 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.37□□□□□ -1.55
CD48P09326 AC068870.3-201ENST00000625077 2536 ntBASIC5.37□□□□□ -1.55
CD48P09326 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.37□□□□□ -1.55
CD48P09326 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CD48P09326 AC011493.1-201ENST00000596753 1632 ntBASIC5.37□□□□□ -1.55
CD48P09326 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CD48P09326 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CD48P09326 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CD48P09326 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
CD48P09326 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CD48P09326 AP005432.1-201ENST00000580891 3485 ntBASIC5.36□□□□□ -1.55
CD48P09326 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CD48P09326 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.36□□□□□ -1.55
CD48P09326 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CD48P09326 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CD48P09326 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 254.7 ms