Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 DNM1P47-203ENST00000571780 12667 ntBASIC5.89□□□□□ -1.47
MMP3P08254 AL360270.2-201ENST00000562952 5985 ntBASIC5.89□□□□□ -1.47
MMP3P08254 TTC41P-205ENST00000551270 3963 ntBASIC5.89□□□□□ -1.47
MMP3P08254 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.89□□□□□ -1.47
MMP3P08254 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.89□□□□□ -1.47
MMP3P08254 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
MMP3P08254 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
MMP3P08254 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
MMP3P08254 AC068446.1-201ENST00000556425 1549 ntBASIC5.89□□□□□ -1.47
MMP3P08254 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
MMP3P08254 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
MMP3P08254 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
MMP3P08254 INTS6P1-201ENST00000504674 2530 ntBASIC5.88□□□□□ -1.47
MMP3P08254 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
MMP3P08254 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.88□□□□□ -1.47
MMP3P08254 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
MMP3P08254 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
MMP3P08254 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
MMP3P08254 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
MMP3P08254 RPL23AP18-201ENST00000416139 468 ntBASIC5.88□□□□□ -1.47
MMP3P08254 AJ239321.1-201ENST00000424255 564 ntBASIC5.88□□□□□ -1.47
MMP3P08254 SEC63P1-201ENST00000425785 1258 ntBASIC5.88□□□□□ -1.47
MMP3P08254 RPS4XP16-201ENST00000427198 791 ntBASIC5.88□□□□□ -1.47
MMP3P08254 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.88□□□□□ -1.47
MMP3P08254 OR52Y1P-201ENST00000452418 828 ntBASIC5.88□□□□□ -1.47
MMP3P08254 AC128716.1-201ENST00000475129 166 ntBASIC5.88□□□□□ -1.47
MMP3P08254 AC083982.1-201ENST00000485679 344 ntBASIC5.88□□□□□ -1.47
MMP3P08254 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.88□□□□□ -1.47
MMP3P08254 AC008628.1-201ENST00000508663 265 ntBASIC5.88□□□□□ -1.47
MMP3P08254 RNU6-943P-201ENST00000516960 98 ntBASIC5.88□□□□□ -1.47
MMP3P08254 AC012400.1-201ENST00000518452 381 ntBASIC5.88□□□□□ -1.47
MMP3P08254 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.88□□□□□ -1.47
MMP3P08254 GTF2IP11-201ENST00000526931 420 ntBASIC5.88□□□□□ -1.47
MMP3P08254 BRD9P1-201ENST00000529855 560 ntBASIC5.88□□□□□ -1.47
MMP3P08254 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.88□□□□□ -1.47
MMP3P08254 HNRNPCP1-201ENST00000556181 766 ntBASIC5.88□□□□□ -1.47
MMP3P08254 MIR3934-201ENST00000579806 107 ntBASIC5.88□□□□□ -1.47
MMP3P08254 MIR4480-201ENST00000582492 71 ntBASIC5.88□□□□□ -1.47
MMP3P08254 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.88□□□□□ -1.47
MMP3P08254 FAM60CP-201ENST00000591086 664 ntBASIC5.88□□□□□ -1.47
MMP3P08254 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.88□□□□□ -1.47
MMP3P08254 AC098483.2-201ENST00000603158 454 ntBASIC5.88□□□□□ -1.47
MMP3P08254 AC087783.2-201ENST00000605070 562 ntBASIC5.88□□□□□ -1.47
MMP3P08254 AC244107.2-201ENST00000611773 76 ntBASIC5.88□□□□□ -1.47
MMP3P08254 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.88□□□□□ -1.47
MMP3P08254 AP003400.3-201ENST00000624904 346 ntBASIC5.88□□□□□ -1.47
MMP3P08254 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.88□□□□□ -1.47
MMP3P08254 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
MMP3P08254 AC079097.1-201ENST00000512187 1399 ntBASIC5.88□□□□□ -1.47
MMP3P08254 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
MMP3P08254 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.88□□□□□ -1.47
MMP3P08254 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
MMP3P08254 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
MMP3P08254 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
MMP3P08254 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
MMP3P08254 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
MMP3P08254 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
MMP3P08254 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
MMP3P08254 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
MMP3P08254 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.87□□□□□ -1.47
MMP3P08254 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
MMP3P08254 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
MMP3P08254 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
MMP3P08254 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.87□□□□□ -1.47
MMP3P08254 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
MMP3P08254 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
MMP3P08254 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.87□□□□□ -1.47
MMP3P08254 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
MMP3P08254 PPIAP9-201ENST00000403866 498 ntBASIC5.87□□□□□ -1.47
MMP3P08254 MIR1182-201ENST00000408363 97 ntBASIC5.87□□□□□ -1.47
MMP3P08254 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.87□□□□□ -1.47
MMP3P08254 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.87□□□□□ -1.47
MMP3P08254 AC009784.1-201ENST00000426484 460 ntBASIC5.87□□□□□ -1.47
MMP3P08254 AC104837.2-201ENST00000427236 424 ntBASIC5.87□□□□□ -1.47
MMP3P08254 AL590399.2-201ENST00000427536 309 ntBASIC5.87□□□□□ -1.47
MMP3P08254 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.87□□□□□ -1.47
MMP3P08254 BX679664.2-201ENST00000439282 283 ntBASIC5.87□□□□□ -1.47
MMP3P08254 TRY2P-201ENST00000448860 689 ntBASIC5.87□□□□□ -1.47
MMP3P08254 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.87□□□□□ -1.47
MMP3P08254 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.87□□□□□ -1.47
MMP3P08254 RPS3AP53-201ENST00000454716 778 ntBASIC5.87□□□□□ -1.47
MMP3P08254 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.87□□□□□ -1.47
MMP3P08254 AC079168.1-201ENST00000458741 345 ntBASIC5.87□□□□□ -1.47
MMP3P08254 snoU13.20-201ENST00000459180 104 ntBASIC5.87□□□□□ -1.47
MMP3P08254 RNU7-157P-201ENST00000459600 66 ntBASIC5.87□□□□□ -1.47
MMP3P08254 PSAT1P4-201ENST00000466500 526 ntBASIC5.87□□□□□ -1.47
MMP3P08254 AC090589.1-201ENST00000473109 362 ntBASIC5.87□□□□□ -1.47
MMP3P08254 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.87□□□□□ -1.47
MMP3P08254 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.87□□□□□ -1.47
MMP3P08254 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.87□□□□□ -1.47
MMP3P08254 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.87□□□□□ -1.47
MMP3P08254 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.87□□□□□ -1.47
MMP3P08254 SETP12-201ENST00000514068 805 ntBASIC5.87□□□□□ -1.47
MMP3P08254 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.87□□□□□ -1.47
MMP3P08254 SUMO2P19-201ENST00000518920 295 ntBASIC5.87□□□□□ -1.47
MMP3P08254 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
MMP3P08254 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.87□□□□□ -1.47
MMP3P08254 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.87□□□□□ -1.47
MMP3P08254 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.87□□□□□ -1.47
MMP3P08254 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 147.7 ms