Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC125494.2-201ENST00000602431 657 ntBASIC6.61□□□□□ -1.35
COL5A2P05997 AC005962.2-201ENST00000611427 652 ntBASIC6.61□□□□□ -1.35
COL5A2P05997 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL5A2P05997 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC6.61□□□□□ -1.35
COL5A2P05997 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COL5A2P05997 AL596275.2-208ENST00000641192 594 ntBASIC6.61□□□□□ -1.35
COL5A2P05997 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL5A2P05997 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.61□□□□□ -1.35
COL5A2P05997 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL5A2P05997 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.61□□□□□ -1.35
COL5A2P05997 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
COL5A2P05997 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COL5A2P05997 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL5A2P05997 AC005412.2-201ENST00000492004 341 ntBASIC6.6□□□□□ -1.35
COL5A2P05997 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC6.6□□□□□ -1.35
COL5A2P05997 IMPA1P1-201ENST00000510718 842 ntBASIC6.6□□□□□ -1.35
COL5A2P05997 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
COL5A2P05997 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC6.6□□□□□ -1.35
COL5A2P05997 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC6.6□□□□□ -1.35
COL5A2P05997 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC6.6□□□□□ -1.35
COL5A2P05997 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL5A2P05997 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.6□□□□□ -1.35
COL5A2P05997 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.6□□□□□ -1.35
COL5A2P05997 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL5A2P05997 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.6□□□□□ -1.35
COL5A2P05997 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
COL5A2P05997 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
COL5A2P05997 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC6.6□□□□□ -1.35
COL5A2P05997 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL5A2P05997 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
COL5A2P05997 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC6.6□□□□□ -1.35
COL5A2P05997 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL5A2P05997 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL5A2P05997 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC6.6□□□□□ -1.35
COL5A2P05997 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.6□□□□□ -1.35
COL5A2P05997 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL5A2P05997 RN7SKP185-201ENST00000362813 326 ntBASIC6.6□□□□□ -1.35
COL5A2P05997 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
COL5A2P05997 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC6.6□□□□□ -1.35
COL5A2P05997 RPL12P34-201ENST00000424532 479 ntBASIC6.6□□□□□ -1.35
COL5A2P05997 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC6.6□□□□□ -1.35
COL5A2P05997 AL136455.1-201ENST00000441083 1240 ntBASIC6.6□□□□□ -1.35
COL5A2P05997 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.6□□□□□ -1.35
COL5A2P05997 OR11I1P-201ENST00000486033 954 ntBASIC6.6□□□□□ -1.35
COL5A2P05997 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL5A2P05997 AP005119.2-201ENST00000579735 1105 ntBASIC6.6□□□□□ -1.35
COL5A2P05997 RPL12P25-202ENST00000598100 674 ntBASIC6.6□□□□□ -1.35
COL5A2P05997 MIR6830-201ENST00000636015 70 ntBASIC6.6□□□□□ -1.35
COL5A2P05997 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
COL5A2P05997 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.59□□□□□ -1.35
COL5A2P05997 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
COL5A2P05997 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
COL5A2P05997 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
COL5A2P05997 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
COL5A2P05997 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
COL5A2P05997 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC6.59□□□□□ -1.35
COL5A2P05997 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
COL5A2P05997 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
COL5A2P05997 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
COL5A2P05997 AC092681.1-201ENST00000297369 291 ntBASIC6.59□□□□□ -1.36
COL5A2P05997 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
COL5A2P05997 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
COL5A2P05997 RNA5SP515-201ENST00000364570 118 ntBASIC6.59□□□□□ -1.36
COL5A2P05997 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.36
COL5A2P05997 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC6.59□□□□□ -1.36
COL5A2P05997 MIR1193-201ENST00000408109 78 ntBASIC6.59□□□□□ -1.36
COL5A2P05997 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC6.59□□□□□ -1.36
COL5A2P05997 MRPS21P2-201ENST00000424704 264 ntBASIC6.59□□□□□ -1.36
COL5A2P05997 AL732292.1-201ENST00000426692 226 ntBASIC6.59□□□□□ -1.36
COL5A2P05997 AL590399.2-201ENST00000427536 309 ntBASIC6.59□□□□□ -1.36
COL5A2P05997 AC000111.2-201ENST00000448200 210 ntBASIC6.59□□□□□ -1.36
COL5A2P05997 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC6.59□□□□□ -1.36
COL5A2P05997 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.59□□□□□ -1.36
COL5A2P05997 RN7SKP248-201ENST00000516278 305 ntBASIC6.59□□□□□ -1.36
COL5A2P05997 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC6.59□□□□□ -1.36
COL5A2P05997 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC6.59□□□□□ -1.36
COL5A2P05997 CCT8P1-201ENST00000413611 1657 ntBASIC6.59□□□□□ -1.36
COL5A2P05997 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL5A2P05997 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.58□□□□□ -1.36
COL5A2P05997 NCLP2-201ENST00000416078 1462 ntBASIC6.58□□□□□ -1.36
COL5A2P05997 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL5A2P05997 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL5A2P05997 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL5A2P05997 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL5A2P05997 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL5A2P05997 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL5A2P05997 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC6.58□□□□□ -1.36
COL5A2P05997 SNORD113.2-201ENST00000364166 89 ntBASIC6.58□□□□□ -1.36
COL5A2P05997 SNORA70.10-201ENST00000384515 134 ntBASIC6.58□□□□□ -1.36
COL5A2P05997 AC114755.2-201ENST00000413520 361 ntBASIC6.58□□□□□ -1.36
COL5A2P05997 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL5A2P05997 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC6.58□□□□□ -1.36
COL5A2P05997 AC007537.2-201ENST00000472093 511 ntBASIC6.58□□□□□ -1.36
COL5A2P05997 RNU2-30P-201ENST00000516209 141 ntBASIC6.58□□□□□ -1.36
COL5A2P05997 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC6.58□□□□□ -1.36
COL5A2P05997 TVP23CP2-201ENST00000571473 623 ntBASIC6.58□□□□□ -1.36
COL5A2P05997 KPNA2P3-201ENST00000584190 848 ntBASIC6.58□□□□□ -1.36
COL5A2P05997 UBA2-208ENST00000592791 910 ntTSL 2 BASIC6.58□□□□□ -1.36
COL5A2P05997 AL356218.2-201ENST00000605264 187 ntBASIC6.58□□□□□ -1.36
COL5A2P05997 AL139041.1-201ENST00000605480 610 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms