Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.82□□□□□ -1.32
PDGFAP04085 AC231657.1-201ENST00000624313 397 ntBASIC6.82□□□□□ -1.32
PDGFAP04085 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC6.82□□□□□ -1.32
PDGFAP04085 CASC19-212ENST00000641153 1287 ntBASIC6.82□□□□□ -1.32
PDGFAP04085 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC6.82□□□□□ -1.32
PDGFAP04085 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
PDGFAP04085 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
PDGFAP04085 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
PDGFAP04085 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
PDGFAP04085 AC091544.5-201ENST00000620192 3815 ntBASIC6.82□□□□□ -1.32
PDGFAP04085 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
PDGFAP04085 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.82□□□□□ -1.32
PDGFAP04085 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
PDGFAP04085 OR4F15-201ENST00000332238 2119 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
PDGFAP04085 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
PDGFAP04085 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC6.82□□□□□ -1.32
PDGFAP04085 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC6.82□□□□□ -1.32
PDGFAP04085 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
PDGFAP04085 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
PDGFAP04085 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.81□□□□□ -1.32
PDGFAP04085 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
PDGFAP04085 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC6.81□□□□□ -1.32
PDGFAP04085 FHL1-204ENST00000370683 2565 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PDGFAP04085 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PDGFAP04085 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PDGFAP04085 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC6.81□□□□□ -1.32
PDGFAP04085 ASNSP1-204ENST00000641977 1664 ntBASIC6.81□□□□□ -1.32
PDGFAP04085 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC6.81□□□□□ -1.32
PDGFAP04085 BRAFP1-201ENST00000445336 2703 ntBASIC6.81□□□□□ -1.32
PDGFAP04085 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PDGFAP04085 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PDGFAP04085 AC005839.1-201ENST00000624148 3213 ntBASIC6.81□□□□□ -1.32
PDGFAP04085 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC6.81□□□□□ -1.32
PDGFAP04085 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PDGFAP04085 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.81□□□□□ -1.32
PDGFAP04085 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PDGFAP04085 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC6.81□□□□□ -1.32
PDGFAP04085 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.81□□□□□ -1.32
PDGFAP04085 RNU1-122P-201ENST00000365538 156 ntBASIC6.81□□□□□ -1.32
PDGFAP04085 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PDGFAP04085 YWHAZP6-201ENST00000399764 738 ntBASIC6.81□□□□□ -1.32
PDGFAP04085 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC6.81□□□□□ -1.32
PDGFAP04085 RN7SKP129-201ENST00000410288 299 ntBASIC6.81□□□□□ -1.32
PDGFAP04085 RN7SKP221-201ENST00000410420 301 ntBASIC6.81□□□□□ -1.32
PDGFAP04085 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC6.81□□□□□ -1.32
PDGFAP04085 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC6.81□□□□□ -1.32
PDGFAP04085 C1DP2-201ENST00000418167 426 ntBASIC6.81□□□□□ -1.32
PDGFAP04085 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC6.81□□□□□ -1.32
PDGFAP04085 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.81□□□□□ -1.32
PDGFAP04085 ANKRD54P1-201ENST00000433115 471 ntBASIC6.81□□□□□ -1.32
PDGFAP04085 CLUHP1-201ENST00000435012 1190 ntBASIC6.81□□□□□ -1.32
PDGFAP04085 AL645568.1-202ENST00000437190 1016 ntTSL 5 BASIC6.81□□□□□ -1.32
PDGFAP04085 AL356121.1-201ENST00000442911 156 ntBASIC6.81□□□□□ -1.32
PDGFAP04085 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PDGFAP04085 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.81□□□□□ -1.32
PDGFAP04085 VDAC2P4-201ENST00000452925 711 ntBASIC6.81□□□□□ -1.32
PDGFAP04085 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
PDGFAP04085 LINC00518-202ENST00000479822 906 ntTSL 3 BASIC6.81□□□□□ -1.32
PDGFAP04085 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PDGFAP04085 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC6.81□□□□□ -1.32
PDGFAP04085 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.81□□□□□ -1.32
PDGFAP04085 SNORA48.10-201ENST00000516965 160 ntBASIC6.81□□□□□ -1.32
PDGFAP04085 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC6.81□□□□□ -1.32
PDGFAP04085 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC6.81□□□□□ -1.32
PDGFAP04085 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC6.81□□□□□ -1.32
PDGFAP04085 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC6.81□□□□□ -1.32
PDGFAP04085 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC6.81□□□□□ -1.32
PDGFAP04085 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC6.81□□□□□ -1.32
PDGFAP04085 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC6.81□□□□□ -1.32
PDGFAP04085 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC6.81□□□□□ -1.32
PDGFAP04085 MIR5697-201ENST00000578045 78 ntBASIC6.81□□□□□ -1.32
PDGFAP04085 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC6.81□□□□□ -1.32
PDGFAP04085 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.81□□□□□ -1.32
PDGFAP04085 BNIP3P9-201ENST00000603714 553 ntBASIC6.81□□□□□ -1.32
PDGFAP04085 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC6.81□□□□□ -1.32
PDGFAP04085 AC008536.2-201ENST00000607284 349 ntBASIC6.81□□□□□ -1.32
PDGFAP04085 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC6.81□□□□□ -1.32
PDGFAP04085 AL121757.2-201ENST00000611223 313 ntBASIC6.81□□□□□ -1.32
PDGFAP04085 AC009033.1-201ENST00000624279 431 ntBASIC6.81□□□□□ -1.32
PDGFAP04085 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC6.81□□□□□ -1.32
PDGFAP04085 SNORA43.5-201ENST00000631270 138 ntBASIC6.81□□□□□ -1.32
PDGFAP04085 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
PDGFAP04085 ATE1-AS1-202ENST00000636460 506 ntBASIC6.81□□□□□ -1.32
PDGFAP04085 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PDGFAP04085 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PDGFAP04085 GPR63-201ENST00000229955 5952 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PDGFAP04085 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
PDGFAP04085 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC6.81□□□□□ -1.32
PDGFAP04085 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC6.81□□□□□ -1.32
PDGFAP04085 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
PDGFAP04085 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PDGFAP04085 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PDGFAP04085 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
PDGFAP04085 CCDC150-201ENST00000389175 3685 ntAPPRIS P2 TSL 5 BASIC6.81□□□□□ -1.32
PDGFAP04085 AC020978.6-201ENST00000571197 3177 ntBASIC6.81□□□□□ -1.32
PDGFAP04085 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC6.81□□□□□ -1.32
PDGFAP04085 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
PDGFAP04085 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PDGFAP04085 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
PDGFAP04085 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms