Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.64□□□□□ -1.51
VTNP04004 AC016745.2-201ENST00000608834 3443 ntBASIC5.64□□□□□ -1.51
VTNP04004 MTCO1P8-201ENST00000416914 1523 ntBASIC5.64□□□□□ -1.51
VTNP04004 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VTNP04004 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.64□□□□□ -1.51
VTNP04004 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VTNP04004 AL132656.3-201ENST00000606384 1595 ntBASIC5.64□□□□□ -1.51
VTNP04004 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VTNP04004 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VTNP04004 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
VTNP04004 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
VTNP04004 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VTNP04004 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
VTNP04004 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.64□□□□□ -1.51
VTNP04004 RN7SKP145-201ENST00000363291 303 ntBASIC5.64□□□□□ -1.51
VTNP04004 RNA5SP428-201ENST00000365129 132 ntBASIC5.64□□□□□ -1.51
VTNP04004 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
VTNP04004 AC240504.1-201ENST00000395709 845 ntBASIC5.64□□□□□ -1.51
VTNP04004 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VTNP04004 CHEK2P3-201ENST00000416118 248 ntBASIC5.64□□□□□ -1.51
VTNP04004 AL360081.1-201ENST00000428299 555 ntBASIC5.64□□□□□ -1.51
VTNP04004 BX323845.1-201ENST00000432417 179 ntBASIC5.64□□□□□ -1.51
VTNP04004 AL049745.1-201ENST00000433953 286 ntBASIC5.64□□□□□ -1.51
VTNP04004 NPM1P48-201ENST00000436002 853 ntBASIC5.64□□□□□ -1.51
VTNP04004 RPS24P16-201ENST00000497294 392 ntBASIC5.64□□□□□ -1.51
VTNP04004 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.64□□□□□ -1.51
VTNP04004 AC097173.1-201ENST00000505862 819 ntBASIC5.64□□□□□ -1.51
VTNP04004 AC002456.2-201ENST00000509356 380 ntBASIC5.64□□□□□ -1.51
VTNP04004 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.64□□□□□ -1.51
VTNP04004 COX6B1P5-201ENST00000509843 249 ntBASIC5.64□□□□□ -1.51
VTNP04004 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.64□□□□□ -1.51
VTNP04004 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VTNP04004 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.64□□□□□ -1.51
VTNP04004 OR7E128P-201ENST00000532736 1024 ntBASIC5.64□□□□□ -1.51
VTNP04004 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
VTNP04004 AC008033.2-201ENST00000542626 177 ntBASIC5.64□□□□□ -1.51
VTNP04004 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.64□□□□□ -1.51
VTNP04004 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.64□□□□□ -1.51
VTNP04004 AC093524.1-201ENST00000564266 1094 ntBASIC5.64□□□□□ -1.51
VTNP04004 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.64□□□□□ -1.51
VTNP04004 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC5.64□□□□□ -1.51
VTNP04004 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.64□□□□□ -1.51
VTNP04004 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.64□□□□□ -1.51
VTNP04004 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
VTNP04004 MIR7853-201ENST00000584820 132 ntBASIC5.64□□□□□ -1.51
VTNP04004 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.64□□□□□ -1.51
VTNP04004 AC011487.3-201ENST00000593607 453 ntBASIC5.64□□□□□ -1.51
VTNP04004 BNIP3P35-201ENST00000604530 490 ntBASIC5.64□□□□□ -1.51
VTNP04004 MEMO1P5-201ENST00000604810 406 ntBASIC5.64□□□□□ -1.51
VTNP04004 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.64□□□□□ -1.51
VTNP04004 AC007786.3-201ENST00000615154 596 ntBASIC5.64□□□□□ -1.51
VTNP04004 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.64□□□□□ -1.51
VTNP04004 AC112694.2-201ENST00000623697 768 ntBASIC5.64□□□□□ -1.51
VTNP04004 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.64□□□□□ -1.51
VTNP04004 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VTNP04004 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VTNP04004 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
VTNP04004 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VTNP04004 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.64□□□□□ -1.51
VTNP04004 AC007996.1-201ENST00000620414 2821 ntBASIC5.64□□□□□ -1.51
VTNP04004 GVINP1-202ENST00000531871 7271 ntBASIC5.64□□□□□ -1.51
VTNP04004 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VTNP04004 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VTNP04004 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.63□□□□□ -1.51
VTNP04004 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VTNP04004 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.63□□□□□ -1.51
VTNP04004 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VTNP04004 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
VTNP04004 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VTNP04004 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VTNP04004 AL353625.1-202ENST00000366273 571 ntBASIC5.63□□□□□ -1.51
VTNP04004 SNORA66-201ENST00000384792 133 ntBASIC5.63□□□□□ -1.51
VTNP04004 AL050305.1-201ENST00000399993 1230 ntBASIC5.63□□□□□ -1.51
VTNP04004 ZNF736P10Y-201ENST00000403990 1110 ntBASIC5.63□□□□□ -1.51
VTNP04004 RPL37P18-201ENST00000411602 243 ntBASIC5.63□□□□□ -1.51
VTNP04004 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.63□□□□□ -1.51
VTNP04004 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.63□□□□□ -1.51
VTNP04004 AL590399.4-201ENST00000436561 601 ntBASIC5.63□□□□□ -1.51
VTNP04004 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.63□□□□□ -1.51
VTNP04004 IGLV2-34-201ENST00000490007 283 ntBASIC5.63□□□□□ -1.51
VTNP04004 RN7SL244P-201ENST00000493405 297 ntBASIC5.63□□□□□ -1.51
VTNP04004 AC010350.1-201ENST00000504908 231 ntBASIC5.63□□□□□ -1.51
VTNP04004 AC112184.1-201ENST00000505179 312 ntBASIC5.63□□□□□ -1.51
VTNP04004 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC5.63□□□□□ -1.51
VTNP04004 BTF3P13-201ENST00000513224 490 ntBASIC5.63□□□□□ -1.51
VTNP04004 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.63□□□□□ -1.51
VTNP04004 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.63□□□□□ -1.51
VTNP04004 GTF2IP11-201ENST00000526931 420 ntBASIC5.63□□□□□ -1.51
VTNP04004 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.63□□□□□ -1.51
VTNP04004 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC5.63□□□□□ -1.51
VTNP04004 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.63□□□□□ -1.51
VTNP04004 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.63□□□□□ -1.51
VTNP04004 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.63□□□□□ -1.51
VTNP04004 MIR6748-201ENST00000610433 71 ntBASIC5.63□□□□□ -1.51
VTNP04004 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.63□□□□□ -1.51
VTNP04004 AL356752.1-201ENST00000615844 593 ntBASIC5.63□□□□□ -1.51
VTNP04004 AC073342.3-201ENST00000624211 193 ntBASIC5.63□□□□□ -1.51
VTNP04004 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.63□□□□□ -1.51
VTNP04004 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
VTNP04004 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms