Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 HSPE1P27-201ENST00000430808 296 ntBASIC5.48□□□□□ -1.53
APOEP02649 AC245047.2-201ENST00000441060 530 ntBASIC5.48□□□□□ -1.53
APOEP02649 AC110749.1-201ENST00000462007 357 ntBASIC5.48□□□□□ -1.53
APOEP02649 AC026348.1-201ENST00000462549 1053 ntBASIC5.48□□□□□ -1.53
APOEP02649 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.48□□□□□ -1.53
APOEP02649 AC072052.1-201ENST00000496556 306 ntBASIC5.48□□□□□ -1.53
APOEP02649 AC006499.3-201ENST00000506077 748 ntBASIC5.48□□□□□ -1.53
APOEP02649 RNA5SP373-201ENST00000517271 95 ntBASIC5.48□□□□□ -1.53
APOEP02649 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.48□□□□□ -1.53
APOEP02649 AC012400.1-201ENST00000518452 381 ntBASIC5.48□□□□□ -1.53
APOEP02649 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.48□□□□□ -1.53
APOEP02649 LSM3P2-201ENST00000551246 273 ntBASIC5.48□□□□□ -1.53
APOEP02649 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.48□□□□□ -1.53
APOEP02649 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.48□□□□□ -1.53
APOEP02649 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.48□□□□□ -1.53
APOEP02649 AC091932.2-201ENST00000623014 291 ntBASIC5.48□□□□□ -1.53
APOEP02649 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.48□□□□□ -1.53
APOEP02649 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
APOEP02649 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
APOEP02649 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
APOEP02649 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
APOEP02649 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
APOEP02649 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
APOEP02649 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.47□□□□□ -1.53
APOEP02649 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
APOEP02649 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.47□□□□□ -1.53
APOEP02649 OR9G4-201ENST00000302957 984 ntBASIC5.47□□□□□ -1.53
APOEP02649 RNU1-146P-201ENST00000364015 165 ntBASIC5.47□□□□□ -1.53
APOEP02649 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
APOEP02649 MIR1178-201ENST00000408396 91 ntBASIC5.47□□□□□ -1.53
APOEP02649 Z68694.1-201ENST00000413929 841 ntBASIC5.47□□□□□ -1.53
APOEP02649 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.47□□□□□ -1.53
APOEP02649 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.47□□□□□ -1.53
APOEP02649 AL139148.1-201ENST00000427122 680 ntBASIC5.47□□□□□ -1.53
APOEP02649 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.47□□□□□ -1.53
APOEP02649 AL161722.2-201ENST00000434731 981 ntBASIC5.47□□□□□ -1.53
APOEP02649 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.47□□□□□ -1.53
APOEP02649 MYO5BP2-201ENST00000449815 1277 ntBASIC5.47□□□□□ -1.53
APOEP02649 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.47□□□□□ -1.53
APOEP02649 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.47□□□□□ -1.53
APOEP02649 CBX1P5-201ENST00000475330 559 ntBASIC5.47□□□□□ -1.53
APOEP02649 RPS12P31-201ENST00000491419 398 ntBASIC5.47□□□□□ -1.53
APOEP02649 RNA5SP92-201ENST00000516437 110 ntBASIC5.47□□□□□ -1.53
APOEP02649 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.47□□□□□ -1.53
APOEP02649 AC027369.5-201ENST00000533838 755 ntBASIC5.47□□□□□ -1.53
APOEP02649 AC024940.3-201ENST00000538551 316 ntBASIC5.47□□□□□ -1.53
APOEP02649 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
APOEP02649 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.47□□□□□ -1.53
APOEP02649 AC127381.1-201ENST00000555979 939 ntBASIC5.47□□□□□ -1.53
APOEP02649 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.47□□□□□ -1.53
APOEP02649 SDR42E1P1-201ENST00000611327 477 ntBASIC5.47□□□□□ -1.53
APOEP02649 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.47□□□□□ -1.53
APOEP02649 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.47□□□□□ -1.53
APOEP02649 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.47□□□□□ -1.53
APOEP02649 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
APOEP02649 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.47□□□□□ -1.53
APOEP02649 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.47□□□□□ -1.53
APOEP02649 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.47□□□□□ -1.53
APOEP02649 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
APOEP02649 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
APOEP02649 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
APOEP02649 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
APOEP02649 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
APOEP02649 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.47□□□□□ -1.53
APOEP02649 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
APOEP02649 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
APOEP02649 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
APOEP02649 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
APOEP02649 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.46□□□□□ -1.53
APOEP02649 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
APOEP02649 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
APOEP02649 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
APOEP02649 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
APOEP02649 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
APOEP02649 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
APOEP02649 SNORA17.1-201ENST00000362945 126 ntBASIC5.46□□□□□ -1.54
APOEP02649 OR8V1P-201ENST00000395193 873 ntBASIC5.46□□□□□ -1.54
APOEP02649 AC005522.1-201ENST00000395416 346 ntBASIC5.46□□□□□ -1.54
APOEP02649 DUTP5-201ENST00000406790 469 ntBASIC5.46□□□□□ -1.54
APOEP02649 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.46□□□□□ -1.54
APOEP02649 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.46□□□□□ -1.54
APOEP02649 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.46□□□□□ -1.54
APOEP02649 AL049874.2-201ENST00000492636 288 ntBASIC5.46□□□□□ -1.54
APOEP02649 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.46□□□□□ -1.54
APOEP02649 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.46□□□□□ -1.54
APOEP02649 EIF3KP3-201ENST00000514461 639 ntBASIC5.46□□□□□ -1.54
APOEP02649 OR10G5P-201ENST00000532733 358 ntBASIC5.46□□□□□ -1.54
APOEP02649 HAUS8P1-201ENST00000549005 542 ntBASIC5.46□□□□□ -1.54
APOEP02649 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.46□□□□□ -1.54
APOEP02649 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.46□□□□□ -1.54
APOEP02649 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.46□□□□□ -1.54
APOEP02649 AC095055.1-201ENST00000603472 1113 ntBASIC5.46□□□□□ -1.54
APOEP02649 AC008833.1-201ENST00000611633 691 ntBASIC5.46□□□□□ -1.54
APOEP02649 AL121612.2-201ENST00000612261 482 ntBASIC5.46□□□□□ -1.54
APOEP02649 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
APOEP02649 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
APOEP02649 AL022322.2-201ENST00000624072 20397 ntBASIC5.46□□□□□ -1.54
APOEP02649 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.54
APOEP02649 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.54
APOEP02649 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms