Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 AC018695.5-201ENST00000605872 315 ntBASIC6.68□□□□□ -1.34
COL3A1P02461 AC020923.1-201ENST00000624021 917 ntBASIC6.68□□□□□ -1.34
COL3A1P02461 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC6.68□□□□□ -1.34
COL3A1P02461 AC119674.1-217ENST00000641942 1086 ntBASIC6.68□□□□□ -1.34
COL3A1P02461 AC073869.10-201ENST00000642016 354 ntBASIC6.68□□□□□ -1.34
COL3A1P02461 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC6.68□□□□□ -1.34
COL3A1P02461 AC131971.1-201ENST00000332881 1482 ntBASIC6.68□□□□□ -1.34
COL3A1P02461 OFD1P9Y-201ENST00000417699 1491 ntBASIC6.68□□□□□ -1.34
COL3A1P02461 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
COL3A1P02461 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
COL3A1P02461 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC6.68□□□□□ -1.34
COL3A1P02461 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC6.68□□□□□ -1.34
COL3A1P02461 AC007342.9-201ENST00000623877 1385 ntBASIC6.68□□□□□ -1.34
COL3A1P02461 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.68□□□□□ -1.34
COL3A1P02461 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
COL3A1P02461 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
COL3A1P02461 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
COL3A1P02461 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL3A1P02461 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL3A1P02461 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
COL3A1P02461 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
COL3A1P02461 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
COL3A1P02461 RN7SKP149-201ENST00000363008 344 ntBASIC6.67□□□□□ -1.34
COL3A1P02461 RN7SKP115-201ENST00000363177 317 ntBASIC6.67□□□□□ -1.34
COL3A1P02461 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL3A1P02461 AF186996.5-201ENST00000418098 904 ntBASIC6.67□□□□□ -1.34
COL3A1P02461 AL137845.2-201ENST00000444292 988 ntBASIC6.67□□□□□ -1.34
COL3A1P02461 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
COL3A1P02461 AC091685.2-201ENST00000454924 864 ntBASIC6.67□□□□□ -1.34
COL3A1P02461 RPL7P16-201ENST00000479738 738 ntBASIC6.67□□□□□ -1.34
COL3A1P02461 AP002981.1-201ENST00000517692 975 ntBASIC6.67□□□□□ -1.34
COL3A1P02461 MORF4L1P3-201ENST00000525966 950 ntBASIC6.67□□□□□ -1.34
COL3A1P02461 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC6.67□□□□□ -1.34
COL3A1P02461 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC6.67□□□□□ -1.34
COL3A1P02461 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC6.67□□□□□ -1.34
COL3A1P02461 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC6.67□□□□□ -1.34
COL3A1P02461 AC012467.1-201ENST00000607740 256 ntBASIC6.67□□□□□ -1.34
COL3A1P02461 NAA60-237ENST00000615865 326 ntTSL 5 BASIC6.67□□□□□ -1.34
COL3A1P02461 AL118508.4-201ENST00000624142 1176 ntBASIC6.67□□□□□ -1.34
COL3A1P02461 AC004777.1-201ENST00000624317 287 ntBASIC6.67□□□□□ -1.34
COL3A1P02461 AC097655.1-201ENST00000635075 318 ntBASIC6.67□□□□□ -1.34
COL3A1P02461 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL3A1P02461 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL3A1P02461 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL3A1P02461 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL3A1P02461 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.67□□□□□ -1.34
COL3A1P02461 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL3A1P02461 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.67□□□□□ -1.34
COL3A1P02461 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC6.67□□□□□ -1.34
COL3A1P02461 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL3A1P02461 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL3A1P02461 TRIM51GP-201ENST00000534741 1350 ntBASIC6.67□□□□□ -1.34
COL3A1P02461 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
COL3A1P02461 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC6.67□□□□□ -1.34
COL3A1P02461 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
COL3A1P02461 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.67□□□□□ -1.34
COL3A1P02461 AC063923.1-201ENST00000478982 1619 ntBASIC6.67□□□□□ -1.34
COL3A1P02461 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL3A1P02461 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL3A1P02461 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL3A1P02461 OR6K3-202ENST00000368146 996 ntBASIC6.66□□□□□ -1.34
COL3A1P02461 AC004074.1-201ENST00000421810 1063 ntBASIC6.66□□□□□ -1.34
COL3A1P02461 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC6.66□□□□□ -1.34
COL3A1P02461 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC6.66□□□□□ -1.34
COL3A1P02461 AL136231.1-201ENST00000429407 730 ntBASIC6.66□□□□□ -1.34
COL3A1P02461 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC6.66□□□□□ -1.34
COL3A1P02461 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC6.66□□□□□ -1.34
COL3A1P02461 snoU13.20-201ENST00000459180 104 ntBASIC6.66□□□□□ -1.34
COL3A1P02461 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
COL3A1P02461 AC114322.1-201ENST00000506771 926 ntBASIC6.66□□□□□ -1.34
COL3A1P02461 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC6.66□□□□□ -1.34
COL3A1P02461 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC6.66□□□□□ -1.34
COL3A1P02461 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC6.66□□□□□ -1.34
COL3A1P02461 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC6.66□□□□□ -1.34
COL3A1P02461 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
COL3A1P02461 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
COL3A1P02461 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
COL3A1P02461 AC016542.1-201ENST00000608259 493 ntBASIC6.66□□□□□ -1.34
COL3A1P02461 AC110792.4-201ENST00000609843 298 ntBASIC6.66□□□□□ -1.34
COL3A1P02461 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC6.66□□□□□ -1.34
COL3A1P02461 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
COL3A1P02461 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
COL3A1P02461 AC093297.3-201ENST00000607056 2517 ntBASIC6.66□□□□□ -1.34
COL3A1P02461 CR1-204ENST00000367052 7469 ntTSL 5 BASIC6.66□□□□□ -1.34
COL3A1P02461 CR1-205ENST00000367053 7469 ntTSL 5 BASIC6.66□□□□□ -1.34
COL3A1P02461 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
COL3A1P02461 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC6.66□□□□□ -1.34
COL3A1P02461 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
COL3A1P02461 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC6.66□□□□□ -1.34
COL3A1P02461 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL3A1P02461 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL3A1P02461 RN7SKP100-201ENST00000411258 284 ntBASIC6.66□□□□□ -1.34
COL3A1P02461 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC6.66□□□□□ -1.34
COL3A1P02461 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC6.66□□□□□ -1.34
COL3A1P02461 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
COL3A1P02461 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC6.66□□□□□ -1.34
COL3A1P02461 AL117351.1-201ENST00000438864 766 ntBASIC6.66□□□□□ -1.34
COL3A1P02461 SCAND3P1-201ENST00000439854 1060 ntBASIC6.66□□□□□ -1.34
COL3A1P02461 GXYLT1P1-201ENST00000446657 490 ntBASIC6.66□□□□□ -1.34
COL3A1P02461 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 156.7 ms