Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LDLRP01130 AC133552.1-201ENST00000569988 4007 ntBASIC5.35□□□□□ -1.55
LDLRP01130 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
LDLRP01130 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LDLRP01130 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
LDLRP01130 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LDLRP01130 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.35□□□□□ -1.55
LDLRP01130 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LDLRP01130 AC024341.1-201ENST00000526444 1552 ntBASIC5.35□□□□□ -1.55
LDLRP01130 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
LDLRP01130 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LDLRP01130 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
LDLRP01130 PDZK1P1-202ENST00000425209 1350 ntBASIC5.35□□□□□ -1.55
LDLRP01130 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LDLRP01130 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LDLRP01130 RN7SKP115-201ENST00000363177 317 ntBASIC5.35□□□□□ -1.55
LDLRP01130 RNA5SP394-201ENST00000364216 119 ntBASIC5.35□□□□□ -1.55
LDLRP01130 RNA5SP500-201ENST00000364486 119 ntBASIC5.35□□□□□ -1.55
LDLRP01130 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.35□□□□□ -1.55
LDLRP01130 AL133270.1-201ENST00000402635 279 ntBASIC5.35□□□□□ -1.55
LDLRP01130 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.35□□□□□ -1.55
LDLRP01130 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.35□□□□□ -1.55
LDLRP01130 AC017019.1-201ENST00000426129 261 ntBASIC5.35□□□□□ -1.55
LDLRP01130 TMEM183AP1-205ENST00000432739 290 ntBASIC5.35□□□□□ -1.55
LDLRP01130 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.35□□□□□ -1.55
LDLRP01130 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.35□□□□□ -1.55
LDLRP01130 AC004815.1-201ENST00000484185 331 ntBASIC5.35□□□□□ -1.55
LDLRP01130 RN7SL57P-201ENST00000493687 290 ntBASIC5.35□□□□□ -1.55
LDLRP01130 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.35□□□□□ -1.55
LDLRP01130 RFPL4AP3-201ENST00000515267 345 ntBASIC5.35□□□□□ -1.55
LDLRP01130 RNA5SP92-201ENST00000516437 110 ntBASIC5.35□□□□□ -1.55
LDLRP01130 AC020937.1-201ENST00000519677 1013 ntBASIC5.35□□□□□ -1.55
LDLRP01130 AC139697.1-201ENST00000548429 745 ntBASIC5.35□□□□□ -1.55
LDLRP01130 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.35□□□□□ -1.55
LDLRP01130 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LDLRP01130 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.35□□□□□ -1.55
LDLRP01130 AC106730.3-201ENST00000624568 641 ntBASIC5.35□□□□□ -1.55
LDLRP01130 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LDLRP01130 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
LDLRP01130 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.35□□□□□ -1.55
LDLRP01130 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
LDLRP01130 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LDLRP01130 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LDLRP01130 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LDLRP01130 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
LDLRP01130 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LDLRP01130 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LDLRP01130 AC083899.1-201ENST00000454465 3819 ntBASIC5.34□□□□□ -1.55
LDLRP01130 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
LDLRP01130 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LDLRP01130 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LDLRP01130 AC079097.1-201ENST00000512187 1399 ntBASIC5.34□□□□□ -1.55
LDLRP01130 TCP11X1-202ENST00000622971 1372 ntBASIC5.34□□□□□ -1.55
LDLRP01130 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LDLRP01130 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
LDLRP01130 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LDLRP01130 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.34□□□□□ -1.55
LDLRP01130 SNORA27.3-201ENST00000364937 134 ntBASIC5.34□□□□□ -1.55
LDLRP01130 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.34□□□□□ -1.55
LDLRP01130 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5.34□□□□□ -1.55
LDLRP01130 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.34□□□□□ -1.55
LDLRP01130 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.34□□□□□ -1.55
LDLRP01130 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.34□□□□□ -1.55
LDLRP01130 AL662874.1-201ENST00000426065 230 ntBASIC5.34□□□□□ -1.55
LDLRP01130 EIF2S2P3-201ENST00000428356 999 ntBASIC5.34□□□□□ -1.55
LDLRP01130 AC126120.1-201ENST00000431082 470 ntBASIC5.34□□□□□ -1.55
LDLRP01130 Z84478.1-201ENST00000438230 1219 ntBASIC5.34□□□□□ -1.55
LDLRP01130 ARAFP2-201ENST00000440565 559 ntBASIC5.34□□□□□ -1.55
LDLRP01130 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.34□□□□□ -1.55
LDLRP01130 EEF1B2P6-201ENST00000445713 673 ntBASIC5.34□□□□□ -1.55
LDLRP01130 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.34□□□□□ -1.55
LDLRP01130 RPL31P20-201ENST00000449593 360 ntBASIC5.34□□□□□ -1.55
LDLRP01130 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.34□□□□□ -1.55
LDLRP01130 AL645937.3-201ENST00000453647 936 ntBASIC5.34□□□□□ -1.55
LDLRP01130 AL157777.1-201ENST00000468100 304 ntBASIC5.34□□□□□ -1.55
LDLRP01130 AC023245.1-201ENST00000468501 517 ntBASIC5.34□□□□□ -1.55
LDLRP01130 UBA52P7-201ENST00000486088 380 ntBASIC5.34□□□□□ -1.55
LDLRP01130 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LDLRP01130 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.34□□□□□ -1.55
LDLRP01130 OR4A46P-201ENST00000527255 933 ntBASIC5.34□□□□□ -1.55
LDLRP01130 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.34□□□□□ -1.55
LDLRP01130 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.34□□□□□ -1.55
LDLRP01130 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.34□□□□□ -1.55
LDLRP01130 AC009852.2-201ENST00000567898 485 ntBASIC5.34□□□□□ -1.55
LDLRP01130 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.34□□□□□ -1.55
LDLRP01130 DHFRP1-201ENST00000579682 559 ntBASIC5.34□□□□□ -1.55
LDLRP01130 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.34□□□□□ -1.55
LDLRP01130 OR51C1P-201ENST00000608504 942 ntBASIC5.34□□□□□ -1.55
LDLRP01130 AL355816.2-201ENST00000610049 647 ntBASIC5.34□□□□□ -1.55
LDLRP01130 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.34□□□□□ -1.55
LDLRP01130 AL139099.4-201ENST00000614802 114 ntBASIC5.34□□□□□ -1.55
LDLRP01130 AC007204.2-201ENST00000615022 616 ntBASIC5.34□□□□□ -1.55
LDLRP01130 CU639417.4-201ENST00000623928 207 ntBASIC5.34□□□□□ -1.55
LDLRP01130 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.34□□□□□ -1.55
LDLRP01130 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.34□□□□□ -1.55
LDLRP01130 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LDLRP01130 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.34□□□□□ -1.55
LDLRP01130 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
LDLRP01130 AC112198.2-201ENST00000426589 6996 ntBASIC5.34□□□□□ -1.55
LDLRP01130 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms