Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
PROM1O43490 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PROM1O43490 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
PROM1O43490 SUCLA2P2-201ENST00000417269 1309 ntBASIC5.73□□□□□ -1.49
PROM1O43490 AL355488.2-201ENST00000609909 2850 ntBASIC5.73□□□□□ -1.49
PROM1O43490 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.72□□□□□ -1.49
PROM1O43490 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PROM1O43490 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
PROM1O43490 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PROM1O43490 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PROM1O43490 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PROM1O43490 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.72□□□□□ -1.49
PROM1O43490 AL445523.1-201ENST00000451184 1362 ntBASIC5.72□□□□□ -1.49
PROM1O43490 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PROM1O43490 AC087516.1-201ENST00000561236 2428 ntBASIC5.72□□□□□ -1.49
PROM1O43490 AC017079.1-201ENST00000333650 415 ntBASIC5.72□□□□□ -1.49
PROM1O43490 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
PROM1O43490 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
PROM1O43490 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
PROM1O43490 RN7SKP166-201ENST00000410812 305 ntBASIC5.72□□□□□ -1.49
PROM1O43490 RN7SKP17-201ENST00000411242 351 ntBASIC5.72□□□□□ -1.49
PROM1O43490 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.72□□□□□ -1.49
PROM1O43490 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.72□□□□□ -1.49
PROM1O43490 HSFY4P-201ENST00000415994 1181 ntBASIC5.72□□□□□ -1.49
PROM1O43490 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.72□□□□□ -1.49
PROM1O43490 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.72□□□□□ -1.49
PROM1O43490 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.72□□□□□ -1.49
PROM1O43490 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC5.72□□□□□ -1.49
PROM1O43490 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.72□□□□□ -1.49
PROM1O43490 AL160175.1-201ENST00000428124 247 ntBASIC5.72□□□□□ -1.49
PROM1O43490 HMGB3P10-201ENST00000434734 572 ntBASIC5.72□□□□□ -1.49
PROM1O43490 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.72□□□□□ -1.49
PROM1O43490 FTLP8-201ENST00000446770 267 ntBASIC5.72□□□□□ -1.49
PROM1O43490 AL157884.3-201ENST00000448273 1184 ntBASIC5.72□□□□□ -1.49
PROM1O43490 AL162739.1-201ENST00000450606 307 ntBASIC5.72□□□□□ -1.49
PROM1O43490 SETP20-201ENST00000457046 852 ntBASIC5.72□□□□□ -1.49
PROM1O43490 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.72□□□□□ -1.49
PROM1O43490 AC124945.1-201ENST00000485133 188 ntBASIC5.72□□□□□ -1.49
PROM1O43490 AC134050.1-201ENST00000495088 933 ntBASIC5.72□□□□□ -1.49
PROM1O43490 CCDC11P1-201ENST00000503137 1162 ntBASIC5.72□□□□□ -1.49
PROM1O43490 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC5.72□□□□□ -1.49
PROM1O43490 HPRT1P1-201ENST00000509498 657 ntBASIC5.72□□□□□ -1.49
PROM1O43490 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.72□□□□□ -1.49
PROM1O43490 AC097486.1-201ENST00000515331 210 ntBASIC5.72□□□□□ -1.49
PROM1O43490 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC5.72□□□□□ -1.49
PROM1O43490 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.72□□□□□ -1.49
PROM1O43490 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.72□□□□□ -1.49
PROM1O43490 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC5.72□□□□□ -1.49
PROM1O43490 AC027026.1-201ENST00000532323 742 ntBASIC5.72□□□□□ -1.49
PROM1O43490 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.72□□□□□ -1.49
PROM1O43490 AP000916.1-201ENST00000533869 835 ntBASIC5.72□□□□□ -1.49
PROM1O43490 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.72□□□□□ -1.49
PROM1O43490 AL356801.1-201ENST00000559320 294 ntBASIC5.72□□□□□ -1.49
PROM1O43490 ZNF971P-201ENST00000562068 1249 ntBASIC5.72□□□□□ -1.49
PROM1O43490 AC092332.1-201ENST00000563684 829 ntBASIC5.72□□□□□ -1.49
PROM1O43490 AC007346.1-201ENST00000569208 867 ntBASIC5.72□□□□□ -1.49
PROM1O43490 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.72□□□□□ -1.49
PROM1O43490 SNORD39.2-201ENST00000579995 76 ntBASIC5.72□□□□□ -1.49
PROM1O43490 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.72□□□□□ -1.49
PROM1O43490 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.72□□□□□ -1.49
PROM1O43490 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.72□□□□□ -1.49
PROM1O43490 MIR132-201ENST00000591554 101 ntBASIC5.72□□□□□ -1.49
PROM1O43490 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.72□□□□□ -1.49
PROM1O43490 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.72□□□□□ -1.49
PROM1O43490 AC015726.1-201ENST00000602353 681 ntBASIC5.72□□□□□ -1.49
PROM1O43490 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.72□□□□□ -1.49
PROM1O43490 AL133370.2-201ENST00000619934 439 ntBASIC5.72□□□□□ -1.49
PROM1O43490 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC5.72□□□□□ -1.49
PROM1O43490 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.72□□□□□ -1.49
PROM1O43490 HSPD1P9-201ENST00000420325 1636 ntBASIC5.72□□□□□ -1.49
PROM1O43490 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.72□□□□□ -1.49
PROM1O43490 ZNF90P1-201ENST00000480493 1951 ntBASIC5.72□□□□□ -1.49
PROM1O43490 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PROM1O43490 AL137141.1-201ENST00000624622 4836 ntBASIC5.72□□□□□ -1.49
PROM1O43490 AC003973.3-201ENST00000624863 2822 ntBASIC5.72□□□□□ -1.49
PROM1O43490 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PROM1O43490 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PROM1O43490 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PROM1O43490 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.72□□□□□ -1.49
PROM1O43490 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.72□□□□□ -1.49
PROM1O43490 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
PROM1O43490 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.72□□□□□ -1.49
PROM1O43490 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.72□□□□□ -1.49
PROM1O43490 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.49
PROM1O43490 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.49
PROM1O43490 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
PROM1O43490 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
PROM1O43490 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.49
PROM1O43490 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.71□□□□□ -1.49
PROM1O43490 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
PROM1O43490 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.71□□□□□ -1.5
PROM1O43490 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
PROM1O43490 AC020656.2-201ENST00000613291 5309 ntBASIC5.71□□□□□ -1.5
PROM1O43490 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.71□□□□□ -1.5
PROM1O43490 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
PROM1O43490 RN7SKP186-201ENST00000365371 303 ntBASIC5.71□□□□□ -1.5
PROM1O43490 SNORD116-8-201ENST00000384365 95 ntBASIC5.71□□□□□ -1.5
PROM1O43490 NPM1P37-201ENST00000403105 874 ntBASIC5.71□□□□□ -1.5
PROM1O43490 RN7SKP206-201ENST00000410823 293 ntBASIC5.71□□□□□ -1.5
PROM1O43490 AC245096.1-201ENST00000413104 546 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms