Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC8.84□□□□□ -1
CUX2O14529 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
CUX2O14529 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC8.83□□□□□ -1
CUX2O14529 OR56B2P-202ENST00000641377 2453 ntBASIC8.83□□□□□ -1
CUX2O14529 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC8.83□□□□□ -1
CUX2O14529 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC8.83□□□□□ -1
CUX2O14529 SNORA66-201ENST00000384792 133 ntBASIC8.83□□□□□ -1
CUX2O14529 RN7SKP114-201ENST00000410327 279 ntBASIC8.83□□□□□ -1
CUX2O14529 RIMKLBP2-201ENST00000424737 654 ntBASIC8.83□□□□□ -1
CUX2O14529 RPS12P10-201ENST00000427031 377 ntBASIC8.83□□□□□ -1
CUX2O14529 AC005154.2-201ENST00000438110 379 ntBASIC8.83□□□□□ -1
CUX2O14529 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC8.83□□□□□ -1
CUX2O14529 AP001880.2-201ENST00000538233 448 ntBASIC8.83□□□□□ -1
CUX2O14529 AC017100.2-201ENST00000584628 355 ntBASIC8.83□□□□□ -1
CUX2O14529 AC009237.13-201ENST00000603193 276 ntBASIC8.83□□□□□ -1
CUX2O14529 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC8.83□□□□□ -1
CUX2O14529 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC8.83□□□□□ -1
CUX2O14529 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC8.83□□□□□ -1
CUX2O14529 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC8.83□□□□□ -1
CUX2O14529 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
CUX2O14529 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
CUX2O14529 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
CUX2O14529 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC8.83□□□□□ -1
CUX2O14529 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
CUX2O14529 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC8.83□□□□□ -1
CUX2O14529 AC144833.1-201ENST00000567953 4089 ntBASIC8.83□□□□□ -1
CUX2O14529 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
CUX2O14529 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
CUX2O14529 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC8.83□□□□□ -1
CUX2O14529 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
CUX2O14529 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC8.83□□□□□ -1
CUX2O14529 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
CUX2O14529 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
CUX2O14529 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC8.83□□□□□ -1
CUX2O14529 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
CUX2O14529 AL731566.1-201ENST00000620490 1937 ntBASIC8.83□□□□□ -1
CUX2O14529 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC8.83□□□□□ -1
CUX2O14529 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC8.83□□□□□ -1
CUX2O14529 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
CUX2O14529 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
CUX2O14529 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC8.83□□□□□ -1
CUX2O14529 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC8.83□□□□□ -1
CUX2O14529 ATP5F1P2-201ENST00000398143 760 ntBASIC8.83□□□□□ -1
CUX2O14529 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC8.83□□□□□ -1
CUX2O14529 AC006499.6-201ENST00000511169 607 ntBASIC8.83□□□□□ -1
CUX2O14529 RN7SKP276-201ENST00000516242 268 ntBASIC8.83□□□□□ -1
CUX2O14529 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC8.83□□□□□ -1
CUX2O14529 AC022916.3-201ENST00000592961 742 ntBASIC8.83□□□□□ -1
CUX2O14529 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC8.83□□□□□ -1
CUX2O14529 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC8.83□□□□□ -1
CUX2O14529 OR51H2P-202ENST00000641424 3046 ntBASIC8.82□□□□□ -1
CUX2O14529 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC8.82□□□□□ -1
CUX2O14529 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
CUX2O14529 AMZ2P2-201ENST00000406819 1057 ntBASIC8.82□□□□□ -1
CUX2O14529 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC8.82□□□□□ -1
CUX2O14529 RCC2P2-201ENST00000422174 918 ntBASIC8.82□□□□□ -1
CUX2O14529 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC8.82□□□□□ -1
CUX2O14529 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC8.82□□□□□ -1
CUX2O14529 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC8.82□□□□□ -1
CUX2O14529 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC8.82□□□□□ -1
CUX2O14529 AC068831.4-201ENST00000556118 109 ntBASIC8.82□□□□□ -1
CUX2O14529 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC8.82□□□□□ -1
CUX2O14529 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
CUX2O14529 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC8.82□□□□□ -1
CUX2O14529 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC8.82□□□□□ -1
CUX2O14529 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
CUX2O14529 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
CUX2O14529 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
CUX2O14529 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC8.81□□□□□ -1
CUX2O14529 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
CUX2O14529 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC8.81□□□□□ -1
CUX2O14529 SNORD113.2-201ENST00000364166 89 ntBASIC8.81□□□□□ -1
CUX2O14529 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC8.81□□□□□ -1
CUX2O14529 SNORD56.6-201ENST00000384569 71 ntBASIC8.81□□□□□ -1
CUX2O14529 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
CUX2O14529 OR7E125P-201ENST00000443450 846 ntBASIC8.81□□□□□ -1
CUX2O14529 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC8.81□□□□□ -1
CUX2O14529 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC8.81□□□□□ -1
CUX2O14529 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC8.81□□□□□ -1
CUX2O14529 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC8.81□□□□□ -1
CUX2O14529 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC8.81□□□□□ -1
CUX2O14529 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC8.81□□□□□ -1
CUX2O14529 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC8.81□□□□□ -1
CUX2O14529 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC8.81□□□□□ -1
CUX2O14529 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
CUX2O14529 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
CUX2O14529 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC8.81□□□□□ -1
CUX2O14529 PRNCR1-201ENST00000635449 12727 ntBASIC8.8□□□□□ -1
CUX2O14529 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC8.8□□□□□ -1
CUX2O14529 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
CUX2O14529 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC8.8□□□□□ -1
CUX2O14529 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
CUX2O14529 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC8.8□□□□□ -1
CUX2O14529 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC8.8□□□□□ -1
CUX2O14529 GNG5P2-201ENST00000372054 207 ntBASIC8.8□□□□□ -1
CUX2O14529 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC8.8□□□□□ -1
CUX2O14529 RPL34P6-201ENST00000432390 345 ntBASIC8.8□□□□□ -1
CUX2O14529 H3F3BP1-201ENST00000440551 403 ntBASIC8.8□□□□□ -1
CUX2O14529 SNORA59A-201ENST00000459326 152 ntBASIC8.8□□□□□ -1
CUX2O14529 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC8.8□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms