Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC108075.1-201ENST00000424692 529 ntBASIC4.85□□□□□ -1.63
UPK1AO00322 RPS4XP16-201ENST00000427198 791 ntBASIC4.85□□□□□ -1.63
UPK1AO00322 AC009238.2-201ENST00000431026 355 ntBASIC4.85□□□□□ -1.63
UPK1AO00322 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.85□□□□□ -1.63
UPK1AO00322 AC016724.1-201ENST00000453215 421 ntBASIC4.85□□□□□ -1.63
UPK1AO00322 AL591473.1-201ENST00000464297 313 ntBASIC4.85□□□□□ -1.63
UPK1AO00322 RPS4XP1-201ENST00000482189 787 ntBASIC4.85□□□□□ -1.63
UPK1AO00322 AC005412.2-201ENST00000492004 341 ntBASIC4.85□□□□□ -1.63
UPK1AO00322 AC073073.1-201ENST00000493920 463 ntBASIC4.85□□□□□ -1.63
UPK1AO00322 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
UPK1AO00322 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.85□□□□□ -1.63
UPK1AO00322 ATP5LP3-201ENST00000514223 304 ntBASIC4.85□□□□□ -1.63
UPK1AO00322 AC138938.1-201ENST00000515431 782 ntBASIC4.85□□□□□ -1.63
UPK1AO00322 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC4.85□□□□□ -1.63
UPK1AO00322 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.85□□□□□ -1.63
UPK1AO00322 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
UPK1AO00322 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.85□□□□□ -1.63
UPK1AO00322 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC4.85□□□□□ -1.63
UPK1AO00322 IMMP1LP3-201ENST00000604197 224 ntBASIC4.85□□□□□ -1.63
UPK1AO00322 Z95327.3-201ENST00000610385 572 ntBASIC4.85□□□□□ -1.63
UPK1AO00322 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.85□□□□□ -1.63
UPK1AO00322 AC135068.12-201ENST00000637370 931 ntBASIC4.85□□□□□ -1.63
UPK1AO00322 MIR4302-201ENST00000638058 60 ntBASIC4.85□□□□□ -1.63
UPK1AO00322 ZNF652P1-201ENST00000442420 1309 ntBASIC4.85□□□□□ -1.63
UPK1AO00322 AC235565.1-201ENST00000456962 1325 ntBASIC4.85□□□□□ -1.63
UPK1AO00322 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
UPK1AO00322 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
UPK1AO00322 AC120036.2-201ENST00000509729 1474 ntBASIC4.85□□□□□ -1.63
UPK1AO00322 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
UPK1AO00322 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.85□□□□□ -1.63
UPK1AO00322 AC020633.1-201ENST00000468439 2247 ntBASIC4.85□□□□□ -1.63
UPK1AO00322 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
UPK1AO00322 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
UPK1AO00322 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
UPK1AO00322 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
UPK1AO00322 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.84□□□□□ -1.63
UPK1AO00322 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.84□□□□□ -1.63
UPK1AO00322 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
UPK1AO00322 AC011493.1-201ENST00000596753 1632 ntBASIC4.84□□□□□ -1.63
UPK1AO00322 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
UPK1AO00322 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.84□□□□□ -1.63
UPK1AO00322 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
UPK1AO00322 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
UPK1AO00322 U3.2-201ENST00000362981 210 ntBASIC4.84□□□□□ -1.63
UPK1AO00322 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
UPK1AO00322 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.84□□□□□ -1.63
UPK1AO00322 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
UPK1AO00322 NUDT19P3-201ENST00000404698 555 ntBASIC4.84□□□□□ -1.63
UPK1AO00322 SNORA11.3-201ENST00000408471 128 ntBASIC4.84□□□□□ -1.63
UPK1AO00322 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.84□□□□□ -1.63
UPK1AO00322 RPL36AP10-201ENST00000421785 322 ntBASIC4.84□□□□□ -1.63
UPK1AO00322 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.84□□□□□ -1.63
UPK1AO00322 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.84□□□□□ -1.63
UPK1AO00322 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.84□□□□□ -1.63
UPK1AO00322 UBE2V2P4-201ENST00000447495 259 ntBASIC4.84□□□□□ -1.63
UPK1AO00322 AL356981.1-201ENST00000454879 684 ntBASIC4.84□□□□□ -1.63
UPK1AO00322 RPL7P39-201ENST00000481157 744 ntBASIC4.84□□□□□ -1.63
UPK1AO00322 UBA52P7-201ENST00000486088 380 ntBASIC4.84□□□□□ -1.63
UPK1AO00322 RPS21P4-201ENST00000487122 248 ntBASIC4.84□□□□□ -1.63
UPK1AO00322 AC024558.1-201ENST00000505008 528 ntBASIC4.84□□□□□ -1.63
UPK1AO00322 AC097173.1-201ENST00000505862 819 ntBASIC4.84□□□□□ -1.63
UPK1AO00322 GTF2F2P1-201ENST00000511083 675 ntBASIC4.84□□□□□ -1.63
UPK1AO00322 RNA5SP464-201ENST00000516251 108 ntBASIC4.84□□□□□ -1.63
UPK1AO00322 RPL23AP53-201ENST00000521854 457 ntBASIC4.84□□□□□ -1.63
UPK1AO00322 AC134349.2-201ENST00000535136 910 ntBASIC4.84□□□□□ -1.63
UPK1AO00322 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
UPK1AO00322 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
UPK1AO00322 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.84□□□□□ -1.63
UPK1AO00322 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
UPK1AO00322 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
UPK1AO00322 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
UPK1AO00322 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
UPK1AO00322 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.84□□□□□ -1.63
UPK1AO00322 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.84□□□□□ -1.63
UPK1AO00322 SNORA11.6-201ENST00000619030 128 ntBASIC4.84□□□□□ -1.63
UPK1AO00322 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.84□□□□□ -1.63
UPK1AO00322 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC4.84□□□□□ -1.63
UPK1AO00322 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.84□□□□□ -1.63
UPK1AO00322 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.84□□□□□ -1.63
UPK1AO00322 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.84□□□□□ -1.63
UPK1AO00322 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
UPK1AO00322 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
UPK1AO00322 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
UPK1AO00322 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.83□□□□□ -1.64
UPK1AO00322 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
UPK1AO00322 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
UPK1AO00322 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
UPK1AO00322 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
UPK1AO00322 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
UPK1AO00322 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
UPK1AO00322 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
UPK1AO00322 AL390316.1-201ENST00000406279 553 ntBASIC4.83□□□□□ -1.64
UPK1AO00322 MIR1182-201ENST00000408363 97 ntBASIC4.83□□□□□ -1.64
UPK1AO00322 SLC35E1P1-201ENST00000419313 864 ntBASIC4.83□□□□□ -1.64
UPK1AO00322 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.83□□□□□ -1.64
UPK1AO00322 AL139148.1-201ENST00000427122 680 ntBASIC4.83□□□□□ -1.64
UPK1AO00322 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC4.83□□□□□ -1.64
UPK1AO00322 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
UPK1AO00322 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.83□□□□□ -1.64
UPK1AO00322 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms