Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 RNU6-88P-201ENST00000606801 100 ntBASIC6.03□□□□□ -1.44
SHISA3A0PJX4 AC107214.2-201ENST00000608204 634 ntBASIC6.03□□□□□ -1.44
SHISA3A0PJX4 AL590560.2-201ENST00000608430 732 ntBASIC6.03□□□□□ -1.44
SHISA3A0PJX4 AL121757.2-201ENST00000611223 313 ntBASIC6.03□□□□□ -1.44
SHISA3A0PJX4 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC6.03□□□□□ -1.44
SHISA3A0PJX4 PFN1P2-202ENST00000621347 397 ntBASIC6.03□□□□□ -1.44
SHISA3A0PJX4 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.03□□□□□ -1.44
SHISA3A0PJX4 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SHISA3A0PJX4 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHISA3A0PJX4 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.03□□□□□ -1.44
SHISA3A0PJX4 AC007485.2-201ENST00000623493 1667 ntBASIC6.03□□□□□ -1.44
SHISA3A0PJX4 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
SHISA3A0PJX4 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
SHISA3A0PJX4 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHISA3A0PJX4 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.03□□□□□ -1.44
SHISA3A0PJX4 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHISA3A0PJX4 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.03□□□□□ -1.44
SHISA3A0PJX4 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHISA3A0PJX4 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHISA3A0PJX4 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHISA3A0PJX4 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC6.03□□□□□ -1.44
SHISA3A0PJX4 AP002370.1-201ENST00000528055 1602 ntBASIC6.03□□□□□ -1.44
SHISA3A0PJX4 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.03□□□□□ -1.44
SHISA3A0PJX4 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.03□□□□□ -1.44
SHISA3A0PJX4 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC6.02□□□□□ -1.44
SHISA3A0PJX4 AL356361.1-201ENST00000400943 1459 ntBASIC6.02□□□□□ -1.44
SHISA3A0PJX4 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC6.02□□□□□ -1.44
SHISA3A0PJX4 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.02□□□□□ -1.45
SHISA3A0PJX4 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.02□□□□□ -1.45
SHISA3A0PJX4 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
SHISA3A0PJX4 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.02□□□□□ -1.45
SHISA3A0PJX4 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SHISA3A0PJX4 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SHISA3A0PJX4 IMMTP1-201ENST00000435590 2219 ntBASIC6.02□□□□□ -1.45
SHISA3A0PJX4 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SHISA3A0PJX4 AC125232.1-201ENST00000452554 1408 ntBASIC6.02□□□□□ -1.45
SHISA3A0PJX4 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC6.02□□□□□ -1.45
SHISA3A0PJX4 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
SHISA3A0PJX4 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
SHISA3A0PJX4 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SHISA3A0PJX4 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SHISA3A0PJX4 TMSB4XP4-201ENST00000323496 618 ntBASIC6.02□□□□□ -1.45
SHISA3A0PJX4 CBX3P1-201ENST00000325243 554 ntBASIC6.02□□□□□ -1.45
SHISA3A0PJX4 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SHISA3A0PJX4 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SHISA3A0PJX4 XGY1-201ENST00000381172 446 ntBASIC6.02□□□□□ -1.45
SHISA3A0PJX4 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
SHISA3A0PJX4 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SHISA3A0PJX4 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SHISA3A0PJX4 HMGB3P23-201ENST00000414981 585 ntBASIC6.02□□□□□ -1.45
SHISA3A0PJX4 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.02□□□□□ -1.45
SHISA3A0PJX4 RPL23AP4-201ENST00000427757 463 ntBASIC6.02□□□□□ -1.45
SHISA3A0PJX4 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC6.02□□□□□ -1.45
SHISA3A0PJX4 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.02□□□□□ -1.45
SHISA3A0PJX4 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC6.02□□□□□ -1.45
SHISA3A0PJX4 AL604028.2-201ENST00000437848 788 ntBASIC6.02□□□□□ -1.45
SHISA3A0PJX4 ANKRD30BP3-201ENST00000444850 1070 ntBASIC6.02□□□□□ -1.45
SHISA3A0PJX4 AC108463.1-201ENST00000450258 347 ntBASIC6.02□□□□□ -1.45
SHISA3A0PJX4 AL935212.3-201ENST00000450729 284 ntBASIC6.02□□□□□ -1.45
SHISA3A0PJX4 AL033528.1-201ENST00000453780 140 ntBASIC6.02□□□□□ -1.45
SHISA3A0PJX4 MTND1P11-201ENST00000456661 876 ntBASIC6.02□□□□□ -1.45
SHISA3A0PJX4 UBDP1-202ENST00000457888 382 ntBASIC6.02□□□□□ -1.45
SHISA3A0PJX4 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
SHISA3A0PJX4 AC010307.1-201ENST00000467206 836 ntBASIC6.02□□□□□ -1.45
SHISA3A0PJX4 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC6.02□□□□□ -1.45
SHISA3A0PJX4 RN7SL143P-201ENST00000496780 297 ntBASIC6.02□□□□□ -1.45
SHISA3A0PJX4 H3F3AP3-201ENST00000497682 407 ntBASIC6.02□□□□□ -1.45
SHISA3A0PJX4 AF186996.3-201ENST00000509527 964 ntBASIC6.02□□□□□ -1.45
SHISA3A0PJX4 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC6.02□□□□□ -1.45
SHISA3A0PJX4 AC026700.1-201ENST00000512074 544 ntBASIC6.02□□□□□ -1.45
SHISA3A0PJX4 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC6.02□□□□□ -1.45
SHISA3A0PJX4 ARL2BPP6-201ENST00000512757 439 ntBASIC6.02□□□□□ -1.45
SHISA3A0PJX4 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC6.02□□□□□ -1.45
SHISA3A0PJX4 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6.02□□□□□ -1.45
SHISA3A0PJX4 AC068631.3-201ENST00000538831 225 ntBASIC6.02□□□□□ -1.45
SHISA3A0PJX4 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SHISA3A0PJX4 RPL3P13-201ENST00000550415 216 ntBASIC6.02□□□□□ -1.45
SHISA3A0PJX4 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC6.02□□□□□ -1.45
SHISA3A0PJX4 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC6.02□□□□□ -1.45
SHISA3A0PJX4 AC120498.6-201ENST00000564700 338 ntTSL 3 BASIC6.02□□□□□ -1.45
SHISA3A0PJX4 AC091489.2-201ENST00000566263 604 ntBASIC6.02□□□□□ -1.45
SHISA3A0PJX4 AC009101.1-201ENST00000568135 242 ntBASIC6.02□□□□□ -1.45
SHISA3A0PJX4 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC6.02□□□□□ -1.45
SHISA3A0PJX4 AC136618.2-201ENST00000575091 400 ntBASIC6.02□□□□□ -1.45
SHISA3A0PJX4 AC064805.1-203ENST00000577560 526 ntTSL 3 BASIC6.02□□□□□ -1.45
SHISA3A0PJX4 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC6.02□□□□□ -1.45
SHISA3A0PJX4 MIR4470-201ENST00000583453 72 ntBASIC6.02□□□□□ -1.45
SHISA3A0PJX4 AC078795.3-201ENST00000602913 472 ntBASIC6.02□□□□□ -1.45
SHISA3A0PJX4 AL953862.2-201ENST00000603089 820 ntBASIC6.02□□□□□ -1.45
SHISA3A0PJX4 AL596327.1-201ENST00000603629 213 ntBASIC6.02□□□□□ -1.45
SHISA3A0PJX4 AC008385.1-201ENST00000604421 355 ntBASIC6.02□□□□□ -1.45
SHISA3A0PJX4 AC009994.1-201ENST00000606889 253 ntBASIC6.02□□□□□ -1.45
SHISA3A0PJX4 AC128687.2-201ENST00000609657 566 ntBASIC6.02□□□□□ -1.45
SHISA3A0PJX4 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC6.02□□□□□ -1.45
SHISA3A0PJX4 AC010133.1-201ENST00000615809 842 ntBASIC6.02□□□□□ -1.45
SHISA3A0PJX4 AC002553.4-201ENST00000616896 331 ntBASIC6.02□□□□□ -1.45
SHISA3A0PJX4 AC234782.5-201ENST00000617723 324 ntBASIC6.02□□□□□ -1.45
SHISA3A0PJX4 MIR6723-201ENST00000621981 89 ntBASIC6.02□□□□□ -1.45
SHISA3A0PJX4 AP000577.1-201ENST00000624366 878 ntBASIC6.02□□□□□ -1.45
SHISA3A0PJX4 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms