Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AL390879.2-203ENST00000426943 1121 ntBASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 HMGN2P27-201ENST00000427352 270 ntBASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 GAPDHP14-201ENST00000450472 937 ntBASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 AC110749.1-201ENST00000462007 357 ntBASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 HMGN1P8-201ENST00000463578 288 ntBASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 AC091912.1-201ENST00000511351 248 ntBASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 RNU6-941P-201ENST00000516346 108 ntBASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 FTH1P11-201ENST00000517577 551 ntBASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 OR8K2P-201ENST00000524645 927 ntBASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 OR8G3P-201ENST00000533406 921 ntBASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 OR11H3P-201ENST00000554547 982 ntBASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 AC011270.1-201ENST00000558606 583 ntBASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 AC009268.1-201ENST00000561352 1203 ntBASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 AC106730.2-201ENST00000566641 540 ntBASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 AC122134.1-202ENST00000569111 1201 ntBASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 AC007938.2-201ENST00000604666 2634 ntBASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 AL512329.2-201ENST00000607350 548 ntBASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 AL139124.1-201ENST00000609123 421 ntBASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 AC135068.5-201ENST00000624197 983 ntBASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 AP005432.1-201ENST00000580891 3485 ntBASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 ABCC13-202ENST00000463099 3842 ntBASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 AC006206.1-201ENST00000544842 3387 ntBASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 AC235565.1-201ENST00000456962 1325 ntBASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 CR788268.1-201ENST00000603931 1809 ntBASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 RNU1-149P-201ENST00000390870 161 ntBASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 AL607077.1-201ENST00000401718 499 ntBASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 AL589994.1-201ENST00000404962 340 ntBASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 SLC35E1P1-201ENST00000419313 864 ntBASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 BX276092.6-201ENST00000430476 250 ntBASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 AC099670.2-201ENST00000435130 321 ntBASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 NDUFB4P8-201ENST00000435351 367 ntBASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 GAPDHP25-201ENST00000447061 1001 ntBASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 BX276092.8-201ENST00000455722 250 ntBASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 MTND3P3-201ENST00000505004 126 ntBASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 RPL10P14-201ENST00000565265 298 ntBASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 AC009962.1-201ENST00000567327 3813 ntBASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 AC074101.1-201ENST00000637861 241 ntBASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 AC245100.2-201ENST00000454544 1679 ntBASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 AL078621.3-201ENST00000623707 2042 ntBASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SNX9Q9Y5X1 PABPC1P6-201ENST00000445594 1829 ntBASIC5.76□□□□□ -1.49
SNX9Q9Y5X1 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SNX9Q9Y5X1 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms