Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 RNU4-7P-201ENST00000364758 141 ntBASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 AL356432.1-201ENST00000405809 419 ntBASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 AC023141.10-201ENST00000415634 200 ntBASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 AC114755.4-201ENST00000439114 443 ntBASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 UBE2V1P5-201ENST00000440070 405 ntBASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 AC140076.1-201ENST00000449897 361 ntBASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 AC021205.1-201ENST00000468797 348 ntBASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 AC022296.2-201ENST00000512424 202 ntBASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 OR5D2P-201ENST00000524390 911 ntBASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 MAL2-203ENST00000534619 578 ntTSL 4 BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 NF1P12-201ENST00000549593 583 ntBASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 AL845331.3-202ENST00000562856 261 ntBASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 AC010327.2-201ENST00000587647 488 ntBASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 AC007136.1-201ENST00000589141 199 ntBASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 AC245014.2-201ENST00000603689 287 ntBASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 AC246785.4-201ENST00000605374 287 ntBASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 AC090948.2-201ENST00000607363 564 ntBASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 DLEU1_2.1-201ENST00000617920 342 ntBASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 AC129778.1-202ENST00000623812 261 ntBASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 AC073488.2-201ENST00000631903 751 ntBASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 AL591379.1-207ENST00000635982 261 ntBASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 AMYH02020865.1-205ENST00000636189 261 ntBASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 AC046144.1-201ENST00000478559 1853 ntBASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 OR4F15-201ENST00000332238 2119 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 AL356361.1-201ENST00000400943 1459 ntBASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 AC090132.1-201ENST00000524071 1480 ntBASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 AC006378.2-201ENST00000623178 2476 ntBASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 FSTL5-203ENST00000427802 2920 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 Y_RNA.166-201ENST00000363730 102 ntBASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 RNY3P3-201ENST00000363816 102 ntBASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 RNU1-122P-201ENST00000365538 156 ntBASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 Y_RNA.419-201ENST00000384041 102 ntBASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 RNA5SP35-201ENST00000391257 129 ntBASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 AL450338.1-201ENST00000407987 512 ntBASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC7.29□□□□□ -1.24
PCDHB11Q9Y5F2 AL158073.1-201ENST00000426848 1104 ntBASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms