Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC6.33□□□□□ -1.4
CTNNA3Q9UI47 AC011225.1-201ENST00000457751 369 ntBASIC6.33□□□□□ -1.4
CTNNA3Q9UI47 RN7SL826P-201ENST00000479724 288 ntBASIC6.33□□□□□ -1.4
CTNNA3Q9UI47 RPL7P6-201ENST00000480903 738 ntBASIC6.33□□□□□ -1.4
CTNNA3Q9UI47 RN7SL727P-201ENST00000482164 296 ntBASIC6.33□□□□□ -1.4
CTNNA3Q9UI47 AC091544.1-201ENST00000484702 348 ntBASIC6.33□□□□□ -1.4
CTNNA3Q9UI47 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC6.33□□□□□ -1.4
CTNNA3Q9UI47 NDUFA5P12-201ENST00000503796 343 ntBASIC6.33□□□□□ -1.4
CTNNA3Q9UI47 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
CTNNA3Q9UI47 RNU6-941P-201ENST00000516346 108 ntBASIC6.33□□□□□ -1.4
CTNNA3Q9UI47 RNA5SP92-201ENST00000516437 110 ntBASIC6.33□□□□□ -1.4
CTNNA3Q9UI47 RNA5SP373-201ENST00000517271 95 ntBASIC6.33□□□□□ -1.4
CTNNA3Q9UI47 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC6.33□□□□□ -1.4
CTNNA3Q9UI47 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC6.33□□□□□ -1.4
CTNNA3Q9UI47 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CTNNA3Q9UI47 AC068993.1-201ENST00000546724 589 ntBASIC6.33□□□□□ -1.4
CTNNA3Q9UI47 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC6.33□□□□□ -1.4
CTNNA3Q9UI47 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC6.33□□□□□ -1.4
CTNNA3Q9UI47 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC6.33□□□□□ -1.4
CTNNA3Q9UI47 AC009597.2-201ENST00000604659 592 ntBASIC6.33□□□□□ -1.4
CTNNA3Q9UI47 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC6.33□□□□□ -1.4
CTNNA3Q9UI47 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CTNNA3Q9UI47 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CTNNA3Q9UI47 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC6.33□□□□□ -1.4
CTNNA3Q9UI47 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CTNNA3Q9UI47 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CTNNA3Q9UI47 AC011755.1-201ENST00000623763 2049 ntBASIC6.33□□□□□ -1.4
CTNNA3Q9UI47 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CTNNA3Q9UI47 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CTNNA3Q9UI47 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC6.33□□□□□ -1.4
CTNNA3Q9UI47 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
CTNNA3Q9UI47 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
CTNNA3Q9UI47 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
CTNNA3Q9UI47 PABPC1P6-201ENST00000445594 1829 ntBASIC6.32□□□□□ -1.4
CTNNA3Q9UI47 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CTNNA3Q9UI47 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
CTNNA3Q9UI47 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.32□□□□□ -1.4
CTNNA3Q9UI47 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
CTNNA3Q9UI47 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CTNNA3Q9UI47 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CTNNA3Q9UI47 AC005294.1-201ENST00000355509 281 ntBASIC6.32□□□□□ -1.4
CTNNA3Q9UI47 OR1L6-202ENST00000373684 1044 ntBASIC6.32□□□□□ -1.4
CTNNA3Q9UI47 SNORA67-201ENST00000384423 137 ntBASIC6.32□□□□□ -1.4
CTNNA3Q9UI47 MIR105-1-201ENST00000385222 81 ntBASIC6.32□□□□□ -1.4
CTNNA3Q9UI47 AL645927.1-201ENST00000396783 406 ntBASIC6.32□□□□□ -1.4
CTNNA3Q9UI47 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC6.32□□□□□ -1.4
CTNNA3Q9UI47 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC6.32□□□□□ -1.4
CTNNA3Q9UI47 HSPD1P12-201ENST00000429127 1069 ntBASIC6.32□□□□□ -1.4
CTNNA3Q9UI47 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC6.32□□□□□ -1.4
CTNNA3Q9UI47 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.32□□□□□ -1.4
CTNNA3Q9UI47 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC6.32□□□□□ -1.4
CTNNA3Q9UI47 AC104634.1-201ENST00000452720 462 ntBASIC6.32□□□□□ -1.4
CTNNA3Q9UI47 CBX1P2-201ENST00000453841 458 ntBASIC6.32□□□□□ -1.4
CTNNA3Q9UI47 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC6.32□□□□□ -1.4
CTNNA3Q9UI47 NDUFB5P1-201ENST00000508134 564 ntBASIC6.32□□□□□ -1.4
CTNNA3Q9UI47 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC6.32□□□□□ -1.4
CTNNA3Q9UI47 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC6.32□□□□□ -1.4
CTNNA3Q9UI47 RN7SL290P-201ENST00000578661 300 ntBASIC6.32□□□□□ -1.4
CTNNA3Q9UI47 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.32□□□□□ -1.4
CTNNA3Q9UI47 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
CTNNA3Q9UI47 AL512329.2-201ENST00000607350 548 ntBASIC6.32□□□□□ -1.4
CTNNA3Q9UI47 OR8G7P-201ENST00000616658 848 ntBASIC6.32□□□□□ -1.4
CTNNA3Q9UI47 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC6.32□□□□□ -1.4
CTNNA3Q9UI47 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.32□□□□□ -1.4
CTNNA3Q9UI47 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.32□□□□□ -1.4
CTNNA3Q9UI47 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
CTNNA3Q9UI47 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC6.31□□□□□ -1.4
CTNNA3Q9UI47 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
CTNNA3Q9UI47 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CTNNA3Q9UI47 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CTNNA3Q9UI47 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC6.31□□□□□ -1.4
CTNNA3Q9UI47 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
CTNNA3Q9UI47 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CTNNA3Q9UI47 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
CTNNA3Q9UI47 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CTNNA3Q9UI47 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
CTNNA3Q9UI47 AC136624.1-201ENST00000400791 413 ntBASIC6.31□□□□□ -1.4
CTNNA3Q9UI47 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC6.31□□□□□ -1.4
CTNNA3Q9UI47 Y_RNA.625-201ENST00000411256 107 ntBASIC6.31□□□□□ -1.4
CTNNA3Q9UI47 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC6.31□□□□□ -1.4
CTNNA3Q9UI47 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.31□□□□□ -1.4
CTNNA3Q9UI47 SLC35E1P1-201ENST00000419313 864 ntBASIC6.31□□□□□ -1.4
CTNNA3Q9UI47 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.31□□□□□ -1.4
CTNNA3Q9UI47 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC6.31□□□□□ -1.4
CTNNA3Q9UI47 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC6.31□□□□□ -1.4
CTNNA3Q9UI47 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC6.31□□□□□ -1.4
CTNNA3Q9UI47 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CTNNA3Q9UI47 AC093827.1-201ENST00000480094 861 ntBASIC6.31□□□□□ -1.4
CTNNA3Q9UI47 AC023424.1-201ENST00000496058 459 ntBASIC6.31□□□□□ -1.4
CTNNA3Q9UI47 IMPA1P1-201ENST00000510718 842 ntBASIC6.31□□□□□ -1.4
CTNNA3Q9UI47 RERGL-202ENST00000536890 367 ntTSL 3 BASIC6.31□□□□□ -1.4
CTNNA3Q9UI47 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC6.31□□□□□ -1.4
CTNNA3Q9UI47 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC6.31□□□□□ -1.4
CTNNA3Q9UI47 NMNAT1P5-201ENST00000559657 841 ntBASIC6.31□□□□□ -1.4
CTNNA3Q9UI47 AC105036.1-201ENST00000566222 271 ntBASIC6.31□□□□□ -1.4
CTNNA3Q9UI47 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CTNNA3Q9UI47 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CTNNA3Q9UI47 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC6.31□□□□□ -1.4
CTNNA3Q9UI47 AL121612.2-201ENST00000612261 482 ntBASIC6.31□□□□□ -1.4
CTNNA3Q9UI47 RPSAP73-201ENST00000614820 330 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms