Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.25□□□□□ -1.41
CLIP2Q9UDT6 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC6.25□□□□□ -1.41
CLIP2Q9UDT6 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC6.25□□□□□ -1.41
CLIP2Q9UDT6 AC090527.3-201ENST00000619041 548 ntBASIC6.25□□□□□ -1.41
CLIP2Q9UDT6 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC6.25□□□□□ -1.41
CLIP2Q9UDT6 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
CLIP2Q9UDT6 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
CLIP2Q9UDT6 AC003985.2-201ENST00000562268 1669 ntBASIC6.25□□□□□ -1.41
CLIP2Q9UDT6 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CLIP2Q9UDT6 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CLIP2Q9UDT6 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
CLIP2Q9UDT6 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC6.25□□□□□ -1.41
CLIP2Q9UDT6 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
CLIP2Q9UDT6 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CLIP2Q9UDT6 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CLIP2Q9UDT6 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
CLIP2Q9UDT6 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CLIP2Q9UDT6 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
CLIP2Q9UDT6 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
CLIP2Q9UDT6 AL050305.1-201ENST00000399993 1230 ntBASIC6.24□□□□□ -1.41
CLIP2Q9UDT6 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CLIP2Q9UDT6 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.24□□□□□ -1.41
CLIP2Q9UDT6 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
CLIP2Q9UDT6 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.24□□□□□ -1.41
CLIP2Q9UDT6 RN7SL610P-201ENST00000463845 291 ntBASIC6.24□□□□□ -1.41
CLIP2Q9UDT6 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC6.24□□□□□ -1.41
CLIP2Q9UDT6 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC6.24□□□□□ -1.41
CLIP2Q9UDT6 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.24□□□□□ -1.41
CLIP2Q9UDT6 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CLIP2Q9UDT6 RN7SL290P-201ENST00000578661 300 ntBASIC6.24□□□□□ -1.41
CLIP2Q9UDT6 AC095055.1-201ENST00000603472 1113 ntBASIC6.24□□□□□ -1.41
CLIP2Q9UDT6 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC6.24□□□□□ -1.41
CLIP2Q9UDT6 AC073136.1-201ENST00000449426 2884 ntBASIC6.24□□□□□ -1.41
CLIP2Q9UDT6 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CLIP2Q9UDT6 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.23□□□□□ -1.41
CLIP2Q9UDT6 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.23□□□□□ -1.41
CLIP2Q9UDT6 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
CLIP2Q9UDT6 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
CLIP2Q9UDT6 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CLIP2Q9UDT6 RNU1-106P-201ENST00000384382 164 ntBASIC6.23□□□□□ -1.41
CLIP2Q9UDT6 AL645927.1-201ENST00000396783 406 ntBASIC6.23□□□□□ -1.41
CLIP2Q9UDT6 PPIAP9-201ENST00000403866 498 ntBASIC6.23□□□□□ -1.41
CLIP2Q9UDT6 RN7SKP213-201ENST00000410746 298 ntBASIC6.23□□□□□ -1.41
CLIP2Q9UDT6 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC6.23□□□□□ -1.41
CLIP2Q9UDT6 AC009127.1-201ENST00000467090 155 ntBASIC6.23□□□□□ -1.41
CLIP2Q9UDT6 BX284632.1-201ENST00000478218 541 ntBASIC6.23□□□□□ -1.41
CLIP2Q9UDT6 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC6.23□□□□□ -1.41
CLIP2Q9UDT6 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC6.23□□□□□ -1.41
CLIP2Q9UDT6 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.23□□□□□ -1.41
CLIP2Q9UDT6 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC6.23□□□□□ -1.41
CLIP2Q9UDT6 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC6.23□□□□□ -1.41
CLIP2Q9UDT6 AC005252.1-201ENST00000604518 1063 ntBASIC6.23□□□□□ -1.41
CLIP2Q9UDT6 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC6.23□□□□□ -1.41
CLIP2Q9UDT6 AC003973.3-201ENST00000624863 2822 ntBASIC6.23□□□□□ -1.41
CLIP2Q9UDT6 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
CLIP2Q9UDT6 ADAM5-202ENST00000399789 1942 ntBASIC6.23□□□□□ -1.41
CLIP2Q9UDT6 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CLIP2Q9UDT6 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
CLIP2Q9UDT6 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CLIP2Q9UDT6 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CLIP2Q9UDT6 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CLIP2Q9UDT6 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.22□□□□□ -1.41
CLIP2Q9UDT6 RNA5SP241-201ENST00000391326 114 ntBASIC6.22□□□□□ -1.41
CLIP2Q9UDT6 NPM1P22-201ENST00000427761 952 ntBASIC6.22□□□□□ -1.41
CLIP2Q9UDT6 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC6.22□□□□□ -1.41
CLIP2Q9UDT6 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.22□□□□□ -1.41
CLIP2Q9UDT6 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.22□□□□□ -1.41
CLIP2Q9UDT6 Z92846.1-201ENST00000456203 268 ntBASIC6.22□□□□□ -1.41
CLIP2Q9UDT6 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.22□□□□□ -1.41
CLIP2Q9UDT6 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.22□□□□□ -1.41
CLIP2Q9UDT6 FTH1P11-201ENST00000517577 551 ntBASIC6.22□□□□□ -1.41
CLIP2Q9UDT6 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.22□□□□□ -1.41
CLIP2Q9UDT6 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC6.22□□□□□ -1.41
CLIP2Q9UDT6 BMPR1APS2-201ENST00000527904 1012 ntBASIC6.22□□□□□ -1.41
CLIP2Q9UDT6 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC6.22□□□□□ -1.41
CLIP2Q9UDT6 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC6.22□□□□□ -1.41
CLIP2Q9UDT6 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.22□□□□□ -1.41
CLIP2Q9UDT6 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC6.22□□□□□ -1.41
CLIP2Q9UDT6 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC6.22□□□□□ -1.41
CLIP2Q9UDT6 AC009027.1-201ENST00000604510 479 ntBASIC6.22□□□□□ -1.41
CLIP2Q9UDT6 AC244107.2-201ENST00000611773 76 ntBASIC6.22□□□□□ -1.41
CLIP2Q9UDT6 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC6.22□□□□□ -1.41
CLIP2Q9UDT6 uc_338.7-201ENST00000621834 124 ntBASIC6.22□□□□□ -1.41
CLIP2Q9UDT6 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
CLIP2Q9UDT6 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CLIP2Q9UDT6 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC6.22□□□□□ -1.41
CLIP2Q9UDT6 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CLIP2Q9UDT6 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC6.22□□□□□ -1.41
CLIP2Q9UDT6 AC019072.1-201ENST00000604535 1551 ntBASIC6.22□□□□□ -1.41
CLIP2Q9UDT6 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CLIP2Q9UDT6 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
CLIP2Q9UDT6 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.21□□□□□ -1.41
CLIP2Q9UDT6 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
CLIP2Q9UDT6 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC6.21□□□□□ -1.41
CLIP2Q9UDT6 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC6.21□□□□□ -1.42
CLIP2Q9UDT6 AC100757.1-201ENST00000616872 1835 ntBASIC6.21□□□□□ -1.42
CLIP2Q9UDT6 AL034549.2-201ENST00000618285 3373 ntBASIC6.21□□□□□ -1.42
CLIP2Q9UDT6 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC6.21□□□□□ -1.42
CLIP2Q9UDT6 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CLIP2Q9UDT6 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms