Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 RN7SKP128-201ENST00000364270 303 ntBASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 RN7SKP78-201ENST00000364711 318 ntBASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 AL139805.1-201ENST00000407837 289 ntBASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 RN7SKP166-201ENST00000410812 305 ntBASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 AL513175.2-201ENST00000422071 443 ntBASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 OSTCP4-201ENST00000424397 449 ntBASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 AC099670.2-201ENST00000435130 321 ntBASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 CXCR2P1-202ENST00000443392 1074 ntBASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 AL157827.1-201ENST00000447622 132 ntBASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 AL157777.1-201ENST00000468100 304 ntBASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 AC104109.1-201ENST00000498563 436 ntBASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 AC010486.2-201ENST00000505572 483 ntBASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 AC095052.1-201ENST00000509955 863 ntBASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 AC018797.1-201ENST00000510791 255 ntBASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 NDUFS5P6-201ENST00000529136 295 ntBASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 AC023050.2-201ENST00000544968 387 ntBASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 AC087897.1-201ENST00000550134 156 ntBASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 AC027243.2-201ENST00000602530 724 ntBASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 AC091057.2-201ENST00000602594 792 ntBASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 AC013470.4-201ENST00000619978 986 ntBASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 AC123767.1-202ENST00000620407 817 ntBASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 AC111152.1-202ENST00000635848 339 ntBASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 AC079776.5-201ENST00000641920 211 ntBASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 AC093671.1-201ENST00000624981 2929 ntBASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
AMBRA1Q9C0C7 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 ZNF849P-201ENST00000594711 1566 ntBASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 AC007342.7-201ENST00000624610 2337 ntBASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 EIF3EP1-201ENST00000433978 1316 ntBASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 RPL11P4-201ENST00000332269 436 ntBASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 RNU6-636P-201ENST00000384598 107 ntBASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 MIR188-201ENST00000385034 86 ntBASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 RNA5SP431-201ENST00000410312 120 ntBASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 MRPS21P2-201ENST00000424704 264 ntBASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 VN1R20P-201ENST00000425215 966 ntBASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 UBE2V1P1-201ENST00000430836 445 ntBASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 AC094019.1-201ENST00000434678 472 ntBASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 AL589880.1-201ENST00000448271 287 ntBASIC5.59□□□□□ -1.51
AMBRA1Q9C0C7 HMGB1P5-202ENST00000451497 985 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 680.8 ms