Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.44□□□□□ -1.54
TRIM4Q9C037 RPS23P6-201ENST00000466136 431 ntBASIC5.44□□□□□ -1.54
TRIM4Q9C037 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.44□□□□□ -1.54
TRIM4Q9C037 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM4Q9C037 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.44□□□□□ -1.54
TRIM4Q9C037 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM4Q9C037 AP002373.2-201ENST00000541631 1060 ntBASIC5.44□□□□□ -1.54
TRIM4Q9C037 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM4Q9C037 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM4Q9C037 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM4Q9C037 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.44□□□□□ -1.54
TRIM4Q9C037 AL139099.4-201ENST00000614802 114 ntBASIC5.44□□□□□ -1.54
TRIM4Q9C037 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.44□□□□□ -1.54
TRIM4Q9C037 AC022919.1-201ENST00000624979 626 ntBASIC5.44□□□□□ -1.54
TRIM4Q9C037 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.44□□□□□ -1.54
TRIM4Q9C037 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.44□□□□□ -1.54
TRIM4Q9C037 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.44□□□□□ -1.54
TRIM4Q9C037 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
TRIM4Q9C037 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM4Q9C037 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
TRIM4Q9C037 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM4Q9C037 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM4Q9C037 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
TRIM4Q9C037 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
TRIM4Q9C037 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
TRIM4Q9C037 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
TRIM4Q9C037 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
TRIM4Q9C037 Z95327.2-201ENST00000414579 1873 ntBASIC5.43□□□□□ -1.54
TRIM4Q9C037 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.43□□□□□ -1.54
TRIM4Q9C037 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.43□□□□□ -1.54
TRIM4Q9C037 RNU1-136P-201ENST00000384181 164 ntBASIC5.43□□□□□ -1.54
TRIM4Q9C037 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.43□□□□□ -1.54
TRIM4Q9C037 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.43□□□□□ -1.54
TRIM4Q9C037 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.43□□□□□ -1.54
TRIM4Q9C037 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.43□□□□□ -1.54
TRIM4Q9C037 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.43□□□□□ -1.54
TRIM4Q9C037 AC023141.8-201ENST00000442554 208 ntBASIC5.43□□□□□ -1.54
TRIM4Q9C037 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.43□□□□□ -1.54
TRIM4Q9C037 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.43□□□□□ -1.54
TRIM4Q9C037 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
TRIM4Q9C037 CEACAMP10-202ENST00000495431 496 ntBASIC5.43□□□□□ -1.54
TRIM4Q9C037 MYL12BP2-201ENST00000503948 512 ntBASIC5.43□□□□□ -1.54
TRIM4Q9C037 AC021146.10-201ENST00000515628 706 ntBASIC5.43□□□□□ -1.54
TRIM4Q9C037 AC139365.2-201ENST00000517972 253 ntBASIC5.43□□□□□ -1.54
TRIM4Q9C037 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM4Q9C037 AL512310.9-201ENST00000553311 948 ntBASIC5.43□□□□□ -1.54
TRIM4Q9C037 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.43□□□□□ -1.54
TRIM4Q9C037 MIR378J-201ENST00000611988 109 ntBASIC5.43□□□□□ -1.54
TRIM4Q9C037 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM4Q9C037 AC009704.2-201ENST00000618739 483 ntBASIC5.43□□□□□ -1.54
TRIM4Q9C037 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.43□□□□□ -1.54
TRIM4Q9C037 AP000346.3-201ENST00000622821 210 ntBASIC5.43□□□□□ -1.54
TRIM4Q9C037 CU639417.4-201ENST00000623928 207 ntBASIC5.43□□□□□ -1.54
TRIM4Q9C037 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.43□□□□□ -1.54
TRIM4Q9C037 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.43□□□□□ -1.54
TRIM4Q9C037 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM4Q9C037 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM4Q9C037 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM4Q9C037 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM4Q9C037 AP004607.3-201ENST00000530354 3915 ntBASIC5.43□□□□□ -1.54
TRIM4Q9C037 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.43□□□□□ -1.54
TRIM4Q9C037 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM4Q9C037 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.43□□□□□ -1.54
TRIM4Q9C037 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM4Q9C037 HSPA8P18-201ENST00000439846 1928 ntBASIC5.42□□□□□ -1.54
TRIM4Q9C037 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM4Q9C037 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
TRIM4Q9C037 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.42□□□□□ -1.54
TRIM4Q9C037 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM4Q9C037 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM4Q9C037 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.42□□□□□ -1.54
TRIM4Q9C037 AL357752.1-201ENST00000412817 349 ntBASIC5.42□□□□□ -1.54
TRIM4Q9C037 HMGB3P24-201ENST00000433260 622 ntBASIC5.42□□□□□ -1.54
TRIM4Q9C037 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.42□□□□□ -1.54
TRIM4Q9C037 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.42□□□□□ -1.54
TRIM4Q9C037 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.42□□□□□ -1.54
TRIM4Q9C037 AC100832.1-201ENST00000471945 383 ntBASIC5.42□□□□□ -1.54
TRIM4Q9C037 AC091544.1-201ENST00000484702 348 ntBASIC5.42□□□□□ -1.54
TRIM4Q9C037 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.42□□□□□ -1.54
TRIM4Q9C037 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM4Q9C037 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.42□□□□□ -1.54
TRIM4Q9C037 SEPT10P1-201ENST00000517342 1162 ntBASIC5.42□□□□□ -1.54
TRIM4Q9C037 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.42□□□□□ -1.54
TRIM4Q9C037 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC5.42□□□□□ -1.54
TRIM4Q9C037 AP000859.1-201ENST00000525536 307 ntBASIC5.42□□□□□ -1.54
TRIM4Q9C037 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.42□□□□□ -1.54
TRIM4Q9C037 AC096996.1-201ENST00000563813 325 ntBASIC5.42□□□□□ -1.54
TRIM4Q9C037 OR1F2P-201ENST00000570470 933 ntBASIC5.42□□□□□ -1.54
TRIM4Q9C037 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.42□□□□□ -1.54
TRIM4Q9C037 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.42□□□□□ -1.54
TRIM4Q9C037 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.42□□□□□ -1.54
TRIM4Q9C037 RN7SL544P-201ENST00000617232 284 ntBASIC5.42□□□□□ -1.54
TRIM4Q9C037 RN7SL763P-201ENST00000620922 284 ntBASIC5.42□□□□□ -1.54
TRIM4Q9C037 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.42□□□□□ -1.54
TRIM4Q9C037 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
TRIM4Q9C037 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
TRIM4Q9C037 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM4Q9C037 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.42□□□□□ -1.54
TRIM4Q9C037 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
TRIM4Q9C037 AL034549.2-201ENST00000618285 3373 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms