Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
UPF3BQ9BZI7 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
UPF3BQ9BZI7 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
UPF3BQ9BZI7 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
UPF3BQ9BZI7 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
UPF3BQ9BZI7 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
UPF3BQ9BZI7 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
UPF3BQ9BZI7 AC063976.2-201ENST00000425667 3556 ntBASIC6.23□□□□□ -1.41
UPF3BQ9BZI7 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
UPF3BQ9BZI7 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.23□□□□□ -1.41
UPF3BQ9BZI7 RPL21P67-201ENST00000402896 478 ntBASIC6.23□□□□□ -1.41
UPF3BQ9BZI7 AL390774.1-201ENST00000411924 246 ntBASIC6.23□□□□□ -1.41
UPF3BQ9BZI7 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.23□□□□□ -1.41
UPF3BQ9BZI7 MGAT2P2-201ENST00000427194 797 ntBASIC6.23□□□□□ -1.41
UPF3BQ9BZI7 CYCSP6-201ENST00000434498 302 ntBASIC6.23□□□□□ -1.41
UPF3BQ9BZI7 AC046176.1-201ENST00000435260 1170 ntBASIC6.23□□□□□ -1.41
UPF3BQ9BZI7 CYCSP12-201ENST00000437729 300 ntBASIC6.23□□□□□ -1.41
UPF3BQ9BZI7 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC6.23□□□□□ -1.41
UPF3BQ9BZI7 RN7SKP66-201ENST00000516681 231 ntBASIC6.23□□□□□ -1.41
UPF3BQ9BZI7 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC6.23□□□□□ -1.41
UPF3BQ9BZI7 OR5D15P-201ENST00000531671 942 ntBASIC6.23□□□□□ -1.41
UPF3BQ9BZI7 OOSP1P2-201ENST00000579644 351 ntBASIC6.23□□□□□ -1.41
UPF3BQ9BZI7 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
UPF3BQ9BZI7 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC6.23□□□□□ -1.41
UPF3BQ9BZI7 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC6.23□□□□□ -1.41
UPF3BQ9BZI7 AC009597.2-201ENST00000604659 592 ntBASIC6.23□□□□□ -1.41
UPF3BQ9BZI7 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
UPF3BQ9BZI7 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
UPF3BQ9BZI7 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC6.23□□□□□ -1.41
UPF3BQ9BZI7 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
UPF3BQ9BZI7 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC6.23□□□□□ -1.41
UPF3BQ9BZI7 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
UPF3BQ9BZI7 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
UPF3BQ9BZI7 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
UPF3BQ9BZI7 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
UPF3BQ9BZI7 BMPR1APS1-201ENST00000403332 1598 ntBASIC6.23□□□□□ -1.41
UPF3BQ9BZI7 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.23□□□□□ -1.41
UPF3BQ9BZI7 AC139426.3-201ENST00000605648 2059 ntBASIC6.22□□□□□ -1.41
UPF3BQ9BZI7 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.22□□□□□ -1.41
UPF3BQ9BZI7 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
UPF3BQ9BZI7 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
UPF3BQ9BZI7 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
UPF3BQ9BZI7 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
UPF3BQ9BZI7 AC006210.2-201ENST00000367074 1545 ntBASIC6.22□□□□□ -1.41
UPF3BQ9BZI7 AC005294.1-201ENST00000355509 281 ntBASIC6.22□□□□□ -1.41
UPF3BQ9BZI7 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
UPF3BQ9BZI7 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
UPF3BQ9BZI7 AC009804.1-201ENST00000400949 179 ntBASIC6.22□□□□□ -1.41
UPF3BQ9BZI7 AL645733.1-201ENST00000402250 217 ntBASIC6.22□□□□□ -1.41
UPF3BQ9BZI7 VN1R54P-201ENST00000435210 1049 ntBASIC6.22□□□□□ -1.41
UPF3BQ9BZI7 RN7SL189P-201ENST00000468631 289 ntBASIC6.22□□□□□ -1.41
UPF3BQ9BZI7 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.22□□□□□ -1.41
UPF3BQ9BZI7 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC6.22□□□□□ -1.41
UPF3BQ9BZI7 CEACAMP10-202ENST00000495431 496 ntBASIC6.22□□□□□ -1.41
UPF3BQ9BZI7 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.22□□□□□ -1.41
UPF3BQ9BZI7 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC6.22□□□□□ -1.41
UPF3BQ9BZI7 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.22□□□□□ -1.41
UPF3BQ9BZI7 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC6.22□□□□□ -1.41
UPF3BQ9BZI7 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.22□□□□□ -1.41
UPF3BQ9BZI7 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC6.22□□□□□ -1.41
UPF3BQ9BZI7 AC126177.5-201ENST00000549599 178 ntBASIC6.22□□□□□ -1.41
UPF3BQ9BZI7 CR383656.6-201ENST00000550518 394 ntBASIC6.22□□□□□ -1.41
UPF3BQ9BZI7 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC6.22□□□□□ -1.41
UPF3BQ9BZI7 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC6.22□□□□□ -1.41
UPF3BQ9BZI7 AC002069.2-201ENST00000603580 883 ntBASIC6.22□□□□□ -1.41
UPF3BQ9BZI7 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC6.22□□□□□ -1.41
UPF3BQ9BZI7 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
UPF3BQ9BZI7 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
UPF3BQ9BZI7 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
UPF3BQ9BZI7 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
UPF3BQ9BZI7 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
UPF3BQ9BZI7 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
UPF3BQ9BZI7 AC114947.2-201ENST00000565748 2125 ntBASIC6.22□□□□□ -1.41
UPF3BQ9BZI7 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
UPF3BQ9BZI7 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC6.22□□□□□ -1.41
UPF3BQ9BZI7 AC131971.1-201ENST00000332881 1482 ntBASIC6.22□□□□□ -1.41
UPF3BQ9BZI7 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
UPF3BQ9BZI7 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
UPF3BQ9BZI7 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.21□□□□□ -1.41
UPF3BQ9BZI7 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
UPF3BQ9BZI7 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
UPF3BQ9BZI7 OR55B1P-203ENST00000641518 2602 ntBASIC6.21□□□□□ -1.41
UPF3BQ9BZI7 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
UPF3BQ9BZI7 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
UPF3BQ9BZI7 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.21□□□□□ -1.42
UPF3BQ9BZI7 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
UPF3BQ9BZI7 RNA5SP223-201ENST00000365174 120 ntBASIC6.21□□□□□ -1.42
UPF3BQ9BZI7 RNU6ATAC18P-201ENST00000408413 101 ntBASIC6.21□□□□□ -1.42
UPF3BQ9BZI7 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC6.21□□□□□ -1.42
UPF3BQ9BZI7 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.21□□□□□ -1.42
UPF3BQ9BZI7 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC6.21□□□□□ -1.42
UPF3BQ9BZI7 VDAC1P6-201ENST00000430062 855 ntBASIC6.21□□□□□ -1.42
UPF3BQ9BZI7 CNOT7P2-201ENST00000441051 832 ntBASIC6.21□□□□□ -1.42
UPF3BQ9BZI7 DNAJB5P1-201ENST00000454004 806 ntBASIC6.21□□□□□ -1.42
UPF3BQ9BZI7 RPL7P45-201ENST00000455851 743 ntBASIC6.21□□□□□ -1.42
UPF3BQ9BZI7 AC021660.1-201ENST00000465006 554 ntBASIC6.21□□□□□ -1.42
UPF3BQ9BZI7 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC6.21□□□□□ -1.42
UPF3BQ9BZI7 NPM1P28-201ENST00000492269 840 ntBASIC6.21□□□□□ -1.42
UPF3BQ9BZI7 AL049874.2-201ENST00000492636 288 ntBASIC6.21□□□□□ -1.42
UPF3BQ9BZI7 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms