Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 FRG1DP-201ENST00000635586 771 ntBASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 AC022164.1-201ENST00000568767 2673 ntBASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
RTFDC1Q9BY42 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.78□□□□□ -1.32
RTFDC1Q9BY42 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.78□□□□□ -1.32
RTFDC1Q9BY42 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RTFDC1Q9BY42 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RTFDC1Q9BY42 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
RTFDC1Q9BY42 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
RTFDC1Q9BY42 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
RTFDC1Q9BY42 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
RTFDC1Q9BY42 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RTFDC1Q9BY42 SNORA56-201ENST00000383966 129 ntBASIC6.78□□□□□ -1.32
RTFDC1Q9BY42 HMGB1P10-201ENST00000395823 563 ntBASIC6.78□□□□□ -1.32
RTFDC1Q9BY42 U3.36-201ENST00000408418 213 ntBASIC6.78□□□□□ -1.32
RTFDC1Q9BY42 RNA5SP251-201ENST00000410614 137 ntBASIC6.78□□□□□ -1.32
RTFDC1Q9BY42 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC6.78□□□□□ -1.32
RTFDC1Q9BY42 AL139128.1-201ENST00000413921 941 ntBASIC6.78□□□□□ -1.32
RTFDC1Q9BY42 AC234781.4-201ENST00000419384 244 ntBASIC6.78□□□□□ -1.32
RTFDC1Q9BY42 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC6.78□□□□□ -1.32
RTFDC1Q9BY42 AC093655.2-201ENST00000425735 631 ntBASIC6.78□□□□□ -1.32
RTFDC1Q9BY42 VN1R21P-201ENST00000426703 765 ntBASIC6.78□□□□□ -1.32
RTFDC1Q9BY42 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.78□□□□□ -1.32
RTFDC1Q9BY42 FAM96AP1-201ENST00000430879 482 ntBASIC6.78□□□□□ -1.32
RTFDC1Q9BY42 MTCYBP12-201ENST00000440559 1134 ntBASIC6.78□□□□□ -1.32
RTFDC1Q9BY42 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.78□□□□□ -1.32
RTFDC1Q9BY42 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC6.78□□□□□ -1.32
RTFDC1Q9BY42 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC6.78□□□□□ -1.32
RTFDC1Q9BY42 RPL6P5-201ENST00000445678 828 ntBASIC6.78□□□□□ -1.32
RTFDC1Q9BY42 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.78□□□□□ -1.32
RTFDC1Q9BY42 ATP5G1P3-201ENST00000463301 410 ntBASIC6.78□□□□□ -1.32
RTFDC1Q9BY42 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.78□□□□□ -1.32
RTFDC1Q9BY42 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC6.78□□□□□ -1.32
RTFDC1Q9BY42 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.78□□□□□ -1.32
RTFDC1Q9BY42 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.78□□□□□ -1.32
RTFDC1Q9BY42 C1DP5-201ENST00000525775 383 ntBASIC6.78□□□□□ -1.32
RTFDC1Q9BY42 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC6.78□□□□□ -1.32
RTFDC1Q9BY42 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC6.78□□□□□ -1.32
RTFDC1Q9BY42 FAM106CP-201ENST00000582212 507 ntBASIC6.78□□□□□ -1.32
RTFDC1Q9BY42 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC6.78□□□□□ -1.32
RTFDC1Q9BY42 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.78□□□□□ -1.32
RTFDC1Q9BY42 AC090772.4-201ENST00000623599 362 ntBASIC6.78□□□□□ -1.32
RTFDC1Q9BY42 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC6.78□□□□□ -1.32
RTFDC1Q9BY42 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.78□□□□□ -1.32
RTFDC1Q9BY42 AC007114.2-201ENST00000576014 4281 ntBASIC6.78□□□□□ -1.32
RTFDC1Q9BY42 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
RTFDC1Q9BY42 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
RTFDC1Q9BY42 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RTFDC1Q9BY42 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
RTFDC1Q9BY42 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.78□□□□□ -1.32
RTFDC1Q9BY42 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
RTFDC1Q9BY42 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
RTFDC1Q9BY42 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.32
RTFDC1Q9BY42 AC003973.3-201ENST00000624863 2822 ntBASIC6.77□□□□□ -1.32
RTFDC1Q9BY42 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
RTFDC1Q9BY42 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
RTFDC1Q9BY42 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
RTFDC1Q9BY42 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.77□□□□□ -1.33
RTFDC1Q9BY42 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.77□□□□□ -1.33
RTFDC1Q9BY42 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
RTFDC1Q9BY42 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
RTFDC1Q9BY42 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
RTFDC1Q9BY42 AC079298.1-201ENST00000625026 1619 ntBASIC6.77□□□□□ -1.33
RTFDC1Q9BY42 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
RTFDC1Q9BY42 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
RTFDC1Q9BY42 MIR16-2-201ENST00000362117 81 ntBASIC6.77□□□□□ -1.33
RTFDC1Q9BY42 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
RTFDC1Q9BY42 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
RTFDC1Q9BY42 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.77□□□□□ -1.33
RTFDC1Q9BY42 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC6.77□□□□□ -1.33
RTFDC1Q9BY42 AC007161.1-204ENST00000423039 460 ntBASIC6.77□□□□□ -1.33
RTFDC1Q9BY42 SRSF1P1-201ENST00000424058 520 ntBASIC6.77□□□□□ -1.33
RTFDC1Q9BY42 AL160175.1-201ENST00000428124 247 ntBASIC6.77□□□□□ -1.33
RTFDC1Q9BY42 HMGB3P10-201ENST00000434734 572 ntBASIC6.77□□□□□ -1.33
RTFDC1Q9BY42 RPS3AP38-201ENST00000435889 763 ntBASIC6.77□□□□□ -1.33
RTFDC1Q9BY42 AC023512.1-201ENST00000444513 499 ntBASIC6.77□□□□□ -1.33
RTFDC1Q9BY42 AL596266.1-201ENST00000448132 400 ntBASIC6.77□□□□□ -1.33
RTFDC1Q9BY42 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6.77□□□□□ -1.33
RTFDC1Q9BY42 HIGD1AP8-201ENST00000453927 274 ntBASIC6.77□□□□□ -1.33
RTFDC1Q9BY42 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.77□□□□□ -1.33
RTFDC1Q9BY42 SETP6-201ENST00000479329 568 ntBASIC6.77□□□□□ -1.33
RTFDC1Q9BY42 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC6.77□□□□□ -1.33
RTFDC1Q9BY42 AC108120.2-201ENST00000512973 294 ntBASIC6.77□□□□□ -1.33
RTFDC1Q9BY42 AC110775.1-201ENST00000513721 462 ntBASIC6.77□□□□□ -1.33
RTFDC1Q9BY42 RNU6-941P-201ENST00000516346 108 ntBASIC6.77□□□□□ -1.33
RTFDC1Q9BY42 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.77□□□□□ -1.33
RTFDC1Q9BY42 HNRNPCP1-201ENST00000556181 766 ntBASIC6.77□□□□□ -1.33
RTFDC1Q9BY42 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms