Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.31□□□□□ -1.56
VPS33AQ96AX1 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.31□□□□□ -1.56
VPS33AQ96AX1 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC5.31□□□□□ -1.56
VPS33AQ96AX1 AL356490.1-201ENST00000623079 479 ntBASIC5.31□□□□□ -1.56
VPS33AQ96AX1 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
VPS33AQ96AX1 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.31□□□□□ -1.56
VPS33AQ96AX1 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
VPS33AQ96AX1 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VPS33AQ96AX1 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
VPS33AQ96AX1 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VPS33AQ96AX1 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.31□□□□□ -1.56
VPS33AQ96AX1 AC104966.1-201ENST00000467010 1464 ntBASIC5.31□□□□□ -1.56
VPS33AQ96AX1 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.31□□□□□ -1.56
VPS33AQ96AX1 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VPS33AQ96AX1 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.31□□□□□ -1.56
VPS33AQ96AX1 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.31□□□□□ -1.56
VPS33AQ96AX1 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
VPS33AQ96AX1 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VPS33AQ96AX1 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VPS33AQ96AX1 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
VPS33AQ96AX1 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.3□□□□□ -1.56
VPS33AQ96AX1 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VPS33AQ96AX1 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
VPS33AQ96AX1 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.3□□□□□ -1.56
VPS33AQ96AX1 RN7SKP184-201ENST00000362348 333 ntBASIC5.3□□□□□ -1.56
VPS33AQ96AX1 RNA5SP273-201ENST00000362484 113 ntBASIC5.3□□□□□ -1.56
VPS33AQ96AX1 RNU6-532P-201ENST00000384318 107 ntBASIC5.3□□□□□ -1.56
VPS33AQ96AX1 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VPS33AQ96AX1 OOSP1-201ENST00000398992 1270 ntBASIC5.3□□□□□ -1.56
VPS33AQ96AX1 PPIAP9-201ENST00000403866 498 ntBASIC5.3□□□□□ -1.56
VPS33AQ96AX1 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
VPS33AQ96AX1 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.3□□□□□ -1.56
VPS33AQ96AX1 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
VPS33AQ96AX1 FAR1P1-201ENST00000427163 934 ntBASIC5.3□□□□□ -1.56
VPS33AQ96AX1 BX323845.3-201ENST00000428215 527 ntBASIC5.3□□□□□ -1.56
VPS33AQ96AX1 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.3□□□□□ -1.56
VPS33AQ96AX1 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.3□□□□□ -1.56
VPS33AQ96AX1 NDUFS5P5-201ENST00000437256 321 ntBASIC5.3□□□□□ -1.56
VPS33AQ96AX1 CASP3P1-201ENST00000446037 609 ntBASIC5.3□□□□□ -1.56
VPS33AQ96AX1 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.3□□□□□ -1.56
VPS33AQ96AX1 AC104339.1-201ENST00000465478 348 ntBASIC5.3□□□□□ -1.56
VPS33AQ96AX1 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VPS33AQ96AX1 RBBP4P1-201ENST00000502424 1276 ntBASIC5.3□□□□□ -1.56
VPS33AQ96AX1 MTCO1P31-201ENST00000506355 492 ntBASIC5.3□□□□□ -1.56
VPS33AQ96AX1 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.3□□□□□ -1.56
VPS33AQ96AX1 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.3□□□□□ -1.56
VPS33AQ96AX1 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.3□□□□□ -1.56
VPS33AQ96AX1 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.3□□□□□ -1.56
VPS33AQ96AX1 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.3□□□□□ -1.56
VPS33AQ96AX1 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.3□□□□□ -1.56
VPS33AQ96AX1 CYCSP38-201ENST00000559840 322 ntBASIC5.3□□□□□ -1.56
VPS33AQ96AX1 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.3□□□□□ -1.56
VPS33AQ96AX1 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
VPS33AQ96AX1 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.3□□□□□ -1.56
VPS33AQ96AX1 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.3□□□□□ -1.56
VPS33AQ96AX1 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.3□□□□□ -1.56
VPS33AQ96AX1 AC063977.5-201ENST00000601044 974 ntBASIC5.3□□□□□ -1.56
VPS33AQ96AX1 AL096803.3-201ENST00000609032 532 ntBASIC5.3□□□□□ -1.56
VPS33AQ96AX1 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.3□□□□□ -1.56
VPS33AQ96AX1 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.3□□□□□ -1.56
VPS33AQ96AX1 AC006453.5-201ENST00000636451 619 ntBASIC5.3□□□□□ -1.56
VPS33AQ96AX1 AC091948.2-201ENST00000636510 279 ntBASIC5.3□□□□□ -1.56
VPS33AQ96AX1 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VPS33AQ96AX1 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VPS33AQ96AX1 PCAT14-202ENST00000627127 3935 ntBASIC5.3□□□□□ -1.56
VPS33AQ96AX1 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.3□□□□□ -1.56
VPS33AQ96AX1 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
VPS33AQ96AX1 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.3□□□□□ -1.56
VPS33AQ96AX1 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
VPS33AQ96AX1 AC005332.5-201ENST00000591222 2919 ntBASIC5.3□□□□□ -1.56
VPS33AQ96AX1 AC079298.1-201ENST00000625026 1619 ntBASIC5.3□□□□□ -1.56
VPS33AQ96AX1 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VPS33AQ96AX1 AC100757.1-201ENST00000616872 1835 ntBASIC5.3□□□□□ -1.56
VPS33AQ96AX1 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.29□□□□□ -1.56
VPS33AQ96AX1 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VPS33AQ96AX1 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VPS33AQ96AX1 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
VPS33AQ96AX1 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.29□□□□□ -1.56
VPS33AQ96AX1 SAMMSON-213ENST00000641336 1521 ntBASIC5.29□□□□□ -1.56
VPS33AQ96AX1 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VPS33AQ96AX1 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.29□□□□□ -1.56
VPS33AQ96AX1 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VPS33AQ96AX1 COX6B1P3-201ENST00000312310 260 ntBASIC5.29□□□□□ -1.56
VPS33AQ96AX1 RNU1-150P-201ENST00000362491 162 ntBASIC5.29□□□□□ -1.56
VPS33AQ96AX1 RNU1-74P-201ENST00000384108 171 ntBASIC5.29□□□□□ -1.56
VPS33AQ96AX1 SNORD56.6-201ENST00000384569 71 ntBASIC5.29□□□□□ -1.56
VPS33AQ96AX1 MIR320B1-201ENST00000390209 79 ntBASIC5.29□□□□□ -1.56
VPS33AQ96AX1 AL009179.1-201ENST00000406085 265 ntBASIC5.29□□□□□ -1.56
VPS33AQ96AX1 MIR1275-201ENST00000408770 80 ntBASIC5.29□□□□□ -1.56
VPS33AQ96AX1 SETP15-201ENST00000412724 337 ntBASIC5.29□□□□□ -1.56
VPS33AQ96AX1 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.29□□□□□ -1.56
VPS33AQ96AX1 OR5M12P-201ENST00000423388 929 ntBASIC5.29□□□□□ -1.56
VPS33AQ96AX1 MTND4P24-201ENST00000424002 397 ntBASIC5.29□□□□□ -1.56
VPS33AQ96AX1 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.29□□□□□ -1.56
VPS33AQ96AX1 MTND4LP7-201ENST00000431728 294 ntBASIC5.29□□□□□ -1.56
VPS33AQ96AX1 GAPDHP34-201ENST00000432112 823 ntBASIC5.29□□□□□ -1.56
VPS33AQ96AX1 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.29□□□□□ -1.56
VPS33AQ96AX1 RPS17P15-201ENST00000475609 349 ntBASIC5.29□□□□□ -1.56
VPS33AQ96AX1 AC093663.2-201ENST00000484625 313 ntBASIC5.29□□□□□ -1.56
VPS33AQ96AX1 COX6B1P2-201ENST00000489624 230 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms