Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC33Q8N5R6 NLRP3P1-201ENST00000622303 1785 ntBASIC6.07□□□□□ -1.44
CCDC33Q8N5R6 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC33Q8N5R6 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
CCDC33Q8N5R6 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC33Q8N5R6 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC6.07□□□□□ -1.44
CCDC33Q8N5R6 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
CCDC33Q8N5R6 AC104964.3-201ENST00000606115 2860 ntBASIC6.07□□□□□ -1.44
CCDC33Q8N5R6 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CCDC33Q8N5R6 AC007342.5-201ENST00000571340 2142 ntBASIC6.07□□□□□ -1.44
CCDC33Q8N5R6 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC33Q8N5R6 AC232271.1-201ENST00000602455 2715 ntBASIC6.06□□□□□ -1.44
CCDC33Q8N5R6 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
CCDC33Q8N5R6 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
CCDC33Q8N5R6 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC33Q8N5R6 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
CCDC33Q8N5R6 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC33Q8N5R6 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC33Q8N5R6 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
CCDC33Q8N5R6 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
CCDC33Q8N5R6 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC33Q8N5R6 RNU6-354P-201ENST00000383862 107 ntBASIC6.06□□□□□ -1.44
CCDC33Q8N5R6 RNU6-610P-201ENST00000384264 107 ntBASIC6.06□□□□□ -1.44
CCDC33Q8N5R6 MIR122-201ENST00000385044 85 ntBASIC6.06□□□□□ -1.44
CCDC33Q8N5R6 HMGB1P20-201ENST00000402555 677 ntBASIC6.06□□□□□ -1.44
CCDC33Q8N5R6 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC33Q8N5R6 MTND4P11-201ENST00000417020 1058 ntBASIC6.06□□□□□ -1.44
CCDC33Q8N5R6 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC33Q8N5R6 RPL34P3-201ENST00000421454 338 ntBASIC6.06□□□□□ -1.44
CCDC33Q8N5R6 SFR1P2-201ENST00000421841 730 ntBASIC6.06□□□□□ -1.44
CCDC33Q8N5R6 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC33Q8N5R6 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC33Q8N5R6 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
CCDC33Q8N5R6 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC33Q8N5R6 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC33Q8N5R6 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC33Q8N5R6 AL157777.1-201ENST00000468100 304 ntBASIC6.06□□□□□ -1.44
CCDC33Q8N5R6 RPL21P47-201ENST00000483696 477 ntBASIC6.06□□□□□ -1.44
CCDC33Q8N5R6 AC107398.1-201ENST00000486904 505 ntBASIC6.06□□□□□ -1.44
CCDC33Q8N5R6 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.06□□□□□ -1.44
CCDC33Q8N5R6 AC136777.2-201ENST00000522979 358 ntBASIC6.06□□□□□ -1.44
CCDC33Q8N5R6 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC33Q8N5R6 CIR1P1-201ENST00000524055 1133 ntBASIC6.06□□□□□ -1.44
CCDC33Q8N5R6 AC090424.1-201ENST00000535243 736 ntBASIC6.06□□□□□ -1.44
CCDC33Q8N5R6 AL049779.3-201ENST00000557141 606 ntBASIC6.06□□□□□ -1.44
CCDC33Q8N5R6 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC33Q8N5R6 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC33Q8N5R6 AC016180.1-201ENST00000567945 403 ntBASIC6.06□□□□□ -1.44
CCDC33Q8N5R6 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC6.06□□□□□ -1.44
CCDC33Q8N5R6 AC025175.1-201ENST00000606482 759 ntBASIC6.06□□□□□ -1.44
CCDC33Q8N5R6 AC090912.3-201ENST00000609775 533 ntBASIC6.06□□□□□ -1.44
CCDC33Q8N5R6 OR4G3P-201ENST00000633500 913 ntBASIC6.06□□□□□ -1.44
CCDC33Q8N5R6 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC33Q8N5R6 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
CCDC33Q8N5R6 AL161912.4-201ENST00000623889 2468 ntBASIC6.06□□□□□ -1.44
CCDC33Q8N5R6 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
CCDC33Q8N5R6 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.06□□□□□ -1.44
CCDC33Q8N5R6 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC33Q8N5R6 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC33Q8N5R6 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC33Q8N5R6 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
CCDC33Q8N5R6 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC33Q8N5R6 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC33Q8N5R6 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC33Q8N5R6 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC33Q8N5R6 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.05□□□□□ -1.44
CCDC33Q8N5R6 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC33Q8N5R6 AC239868.2-201ENST00000564237 4527 ntBASIC6.05□□□□□ -1.44
CCDC33Q8N5R6 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC33Q8N5R6 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC33Q8N5R6 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC33Q8N5R6 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.05□□□□□ -1.44
CCDC33Q8N5R6 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.05□□□□□ -1.44
CCDC33Q8N5R6 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC33Q8N5R6 RNA5SP500-201ENST00000364486 119 ntBASIC6.05□□□□□ -1.44
CCDC33Q8N5R6 ATP5HP3-201ENST00000396994 486 ntBASIC6.05□□□□□ -1.44
CCDC33Q8N5R6 OR3A2-201ENST00000408891 1076 ntBASIC6.05□□□□□ -1.44
CCDC33Q8N5R6 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.05□□□□□ -1.44
CCDC33Q8N5R6 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.05□□□□□ -1.44
CCDC33Q8N5R6 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.05□□□□□ -1.44
CCDC33Q8N5R6 BRWD1P3-201ENST00000428816 390 ntBASIC6.05□□□□□ -1.44
CCDC33Q8N5R6 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC33Q8N5R6 TRBV26OR9-2-201ENST00000432077 293 ntBASIC6.05□□□□□ -1.44
CCDC33Q8N5R6 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC6.05□□□□□ -1.44
CCDC33Q8N5R6 AC006994.1-201ENST00000438212 839 ntBASIC6.05□□□□□ -1.44
CCDC33Q8N5R6 AC002504.1-201ENST00000438281 691 ntBASIC6.05□□□□□ -1.44
CCDC33Q8N5R6 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.05□□□□□ -1.44
CCDC33Q8N5R6 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC33Q8N5R6 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC6.05□□□□□ -1.44
CCDC33Q8N5R6 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.05□□□□□ -1.44
CCDC33Q8N5R6 OSTCP1-201ENST00000455507 450 ntBASIC6.05□□□□□ -1.44
CCDC33Q8N5R6 AC004129.2-201ENST00000457229 287 ntBASIC6.05□□□□□ -1.44
CCDC33Q8N5R6 CBX1P5-201ENST00000475330 559 ntBASIC6.05□□□□□ -1.44
CCDC33Q8N5R6 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC6.05□□□□□ -1.44
CCDC33Q8N5R6 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.05□□□□□ -1.44
CCDC33Q8N5R6 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC6.05□□□□□ -1.44
CCDC33Q8N5R6 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.05□□□□□ -1.44
CCDC33Q8N5R6 MTHFD2P4-201ENST00000515074 1025 ntBASIC6.05□□□□□ -1.44
CCDC33Q8N5R6 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC33Q8N5R6 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms