Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AC130364.2-201ENST00000528639 604 ntBASIC6.74□□□□□ -1.33
SYNE4Q8N205 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC6.74□□□□□ -1.33
SYNE4Q8N205 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC6.74□□□□□ -1.33
SYNE4Q8N205 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.74□□□□□ -1.33
SYNE4Q8N205 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SYNE4Q8N205 AF230666.2-201ENST00000602328 725 ntBASIC6.74□□□□□ -1.33
SYNE4Q8N205 AC095055.1-201ENST00000603472 1113 ntBASIC6.74□□□□□ -1.33
SYNE4Q8N205 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
SYNE4Q8N205 AC097372.4-201ENST00000625025 466 ntBASIC6.74□□□□□ -1.33
SYNE4Q8N205 AL353662.3-201ENST00000625131 237 ntBASIC6.74□□□□□ -1.33
SYNE4Q8N205 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.74□□□□□ -1.33
SYNE4Q8N205 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.74□□□□□ -1.33
SYNE4Q8N205 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SYNE4Q8N205 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SYNE4Q8N205 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SYNE4Q8N205 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SYNE4Q8N205 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC6.73□□□□□ -1.33
SYNE4Q8N205 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
SYNE4Q8N205 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
SYNE4Q8N205 AC005225.5-201ENST00000623547 2225 ntBASIC6.73□□□□□ -1.33
SYNE4Q8N205 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
SYNE4Q8N205 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.73□□□□□ -1.33
SYNE4Q8N205 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.73□□□□□ -1.33
SYNE4Q8N205 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
SYNE4Q8N205 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SYNE4Q8N205 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.73□□□□□ -1.33
SYNE4Q8N205 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SYNE4Q8N205 RNU1-59P-201ENST00000364829 162 ntBASIC6.73□□□□□ -1.33
SYNE4Q8N205 MIR122-201ENST00000385044 85 ntBASIC6.73□□□□□ -1.33
SYNE4Q8N205 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
SYNE4Q8N205 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
SYNE4Q8N205 PCNPP4-201ENST00000414817 517 ntBASIC6.73□□□□□ -1.33
SYNE4Q8N205 ATP6V1G1P7-201ENST00000415853 349 ntBASIC6.73□□□□□ -1.33
SYNE4Q8N205 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC6.73□□□□□ -1.33
SYNE4Q8N205 AC104837.2-201ENST00000427236 424 ntBASIC6.73□□□□□ -1.33
SYNE4Q8N205 AL590623.1-201ENST00000427864 105 ntBASIC6.73□□□□□ -1.33
SYNE4Q8N205 RPL7P56-201ENST00000429441 717 ntBASIC6.73□□□□□ -1.33
SYNE4Q8N205 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC6.73□□□□□ -1.33
SYNE4Q8N205 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.73□□□□□ -1.33
SYNE4Q8N205 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC6.73□□□□□ -1.33
SYNE4Q8N205 AL451063.1-201ENST00000450164 1133 ntBASIC6.73□□□□□ -1.33
SYNE4Q8N205 AL672138.1-201ENST00000450604 1015 ntBASIC6.73□□□□□ -1.33
SYNE4Q8N205 AC002075.1-201ENST00000457396 676 ntBASIC6.73□□□□□ -1.33
SYNE4Q8N205 RPS3AP41-201ENST00000462701 778 ntBASIC6.73□□□□□ -1.33
SYNE4Q8N205 PDCL3P4-201ENST00000489621 720 ntBASIC6.73□□□□□ -1.33
SYNE4Q8N205 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SYNE4Q8N205 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
SYNE4Q8N205 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC6.73□□□□□ -1.33
SYNE4Q8N205 AC016550.1-201ENST00000505348 785 ntBASIC6.73□□□□□ -1.33
SYNE4Q8N205 RPS4XP20-201ENST00000505751 772 ntBASIC6.73□□□□□ -1.33
SYNE4Q8N205 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC6.73□□□□□ -1.33
SYNE4Q8N205 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC6.73□□□□□ -1.33
SYNE4Q8N205 AC109464.1-201ENST00000511091 819 ntBASIC6.73□□□□□ -1.33
SYNE4Q8N205 AC117525.1-201ENST00000515228 503 ntBASIC6.73□□□□□ -1.33
SYNE4Q8N205 RN7SKP147-201ENST00000517154 244 ntBASIC6.73□□□□□ -1.33
SYNE4Q8N205 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC6.73□□□□□ -1.33
SYNE4Q8N205 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.73□□□□□ -1.33
SYNE4Q8N205 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC6.73□□□□□ -1.33
SYNE4Q8N205 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC6.73□□□□□ -1.33
SYNE4Q8N205 NPM1P42-201ENST00000560329 862 ntBASIC6.73□□□□□ -1.33
SYNE4Q8N205 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC6.73□□□□□ -1.33
SYNE4Q8N205 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC6.73□□□□□ -1.33
SYNE4Q8N205 LINC00557-201ENST00000563184 1279 ntBASIC6.73□□□□□ -1.33
SYNE4Q8N205 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC6.73□□□□□ -1.33
SYNE4Q8N205 MIR4330-201ENST00000579077 105 ntBASIC6.73□□□□□ -1.33
SYNE4Q8N205 RN7SL339P-201ENST00000580597 296 ntBASIC6.73□□□□□ -1.33
SYNE4Q8N205 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC6.73□□□□□ -1.33
SYNE4Q8N205 H3F3BP2-201ENST00000583907 357 ntBASIC6.73□□□□□ -1.33
SYNE4Q8N205 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC6.73□□□□□ -1.33
SYNE4Q8N205 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC6.73□□□□□ -1.33
SYNE4Q8N205 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC6.73□□□□□ -1.33
SYNE4Q8N205 AC087783.2-201ENST00000605070 562 ntBASIC6.73□□□□□ -1.33
SYNE4Q8N205 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC6.73□□□□□ -1.33
SYNE4Q8N205 AC117490.2-201ENST00000610042 594 ntBASIC6.73□□□□□ -1.33
SYNE4Q8N205 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC6.73□□□□□ -1.33
SYNE4Q8N205 AC087683.2-201ENST00000611384 326 ntBASIC6.73□□□□□ -1.33
SYNE4Q8N205 U1.25-201ENST00000614085 162 ntBASIC6.73□□□□□ -1.33
SYNE4Q8N205 U1.34-201ENST00000618578 162 ntBASIC6.73□□□□□ -1.33
SYNE4Q8N205 AL162233.1-201ENST00000620014 944 ntBASIC6.73□□□□□ -1.33
SYNE4Q8N205 U1.31-201ENST00000620022 160 ntBASIC6.73□□□□□ -1.33
SYNE4Q8N205 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
SYNE4Q8N205 AC073869.8-201ENST00000641806 335 ntBASIC6.73□□□□□ -1.33
SYNE4Q8N205 AC068769.1-201ENST00000474767 2426 ntBASIC6.73□□□□□ -1.33
SYNE4Q8N205 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.73□□□□□ -1.33
SYNE4Q8N205 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.73□□□□□ -1.33
SYNE4Q8N205 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
SYNE4Q8N205 OR4F13P-202ENST00000560066 2054 ntBASIC6.73□□□□□ -1.33
SYNE4Q8N205 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
SYNE4Q8N205 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.73□□□□□ -1.33
SYNE4Q8N205 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
SYNE4Q8N205 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
SYNE4Q8N205 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SYNE4Q8N205 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
SYNE4Q8N205 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC6.73□□□□□ -1.33
SYNE4Q8N205 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.72□□□□□ -1.33
SYNE4Q8N205 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.72□□□□□ -1.33
SYNE4Q8N205 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.72□□□□□ -1.33
SYNE4Q8N205 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.72□□□□□ -1.33
SYNE4Q8N205 API5-210ENST00000534600 1760 ntTSL 5 BASIC6.72□□□□□ -1.33
SYNE4Q8N205 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms