Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC65Q8IXS2 U3.3-201ENST00000362986 216 ntBASIC5.8□□□□□ -1.48
CCDC65Q8IXS2 RNA5SP90-201ENST00000364801 99 ntBASIC5.8□□□□□ -1.48
CCDC65Q8IXS2 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC65Q8IXS2 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CCDC65Q8IXS2 AL358178.1-201ENST00000407698 397 ntBASIC5.8□□□□□ -1.48
CCDC65Q8IXS2 SNORA11.3-201ENST00000408471 128 ntBASIC5.8□□□□□ -1.48
CCDC65Q8IXS2 NPM1P4-201ENST00000414095 812 ntBASIC5.8□□□□□ -1.48
CCDC65Q8IXS2 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC65Q8IXS2 RPS29P10-201ENST00000439197 166 ntBASIC5.8□□□□□ -1.48
CCDC65Q8IXS2 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC65Q8IXS2 BX842559.2-201ENST00000451418 605 ntBASIC5.8□□□□□ -1.48
CCDC65Q8IXS2 PRPF38AP1-201ENST00000451976 933 ntBASIC5.8□□□□□ -1.48
CCDC65Q8IXS2 OR2AO1P-201ENST00000476497 403 ntBASIC5.8□□□□□ -1.48
CCDC65Q8IXS2 AC023424.1-201ENST00000496058 459 ntBASIC5.8□□□□□ -1.48
CCDC65Q8IXS2 AC015864.1-201ENST00000496512 544 ntBASIC5.8□□□□□ -1.48
CCDC65Q8IXS2 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC65Q8IXS2 AC106872.4-201ENST00000510050 523 ntBASIC5.8□□□□□ -1.48
CCDC65Q8IXS2 IGKV2-18-201ENST00000522607 343 ntBASIC5.8□□□□□ -1.48
CCDC65Q8IXS2 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
CCDC65Q8IXS2 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.8□□□□□ -1.48
CCDC65Q8IXS2 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.8□□□□□ -1.48
CCDC65Q8IXS2 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC65Q8IXS2 AC118658.2-201ENST00000618697 459 ntBASIC5.8□□□□□ -1.48
CCDC65Q8IXS2 SNORA11.6-201ENST00000619030 128 ntBASIC5.8□□□□□ -1.48
CCDC65Q8IXS2 AC074140.1-201ENST00000621617 208 ntBASIC5.8□□□□□ -1.48
CCDC65Q8IXS2 AC135068.12-201ENST00000637370 931 ntBASIC5.8□□□□□ -1.48
CCDC65Q8IXS2 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
CCDC65Q8IXS2 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC65Q8IXS2 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
CCDC65Q8IXS2 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC65Q8IXS2 AL034549.2-201ENST00000618285 3373 ntBASIC5.8□□□□□ -1.48
CCDC65Q8IXS2 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
CCDC65Q8IXS2 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
CCDC65Q8IXS2 SMG1P7-201ENST00000565246 2704 ntBASIC5.8□□□□□ -1.48
CCDC65Q8IXS2 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC65Q8IXS2 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.79□□□□□ -1.48
CCDC65Q8IXS2 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC65Q8IXS2 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CCDC65Q8IXS2 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CCDC65Q8IXS2 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC65Q8IXS2 RN7SKP74-201ENST00000362849 309 ntBASIC5.79□□□□□ -1.48
CCDC65Q8IXS2 RN7SKP162-201ENST00000363605 345 ntBASIC5.79□□□□□ -1.48
CCDC65Q8IXS2 RNU6-673P-201ENST00000365084 104 ntBASIC5.79□□□□□ -1.48
CCDC65Q8IXS2 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC65Q8IXS2 AC007618.1-201ENST00000366455 732 ntBASIC5.79□□□□□ -1.48
CCDC65Q8IXS2 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC65Q8IXS2 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC65Q8IXS2 COX5BP7-201ENST00000414780 274 ntBASIC5.79□□□□□ -1.48
CCDC65Q8IXS2 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC65Q8IXS2 AC108075.1-201ENST00000424692 529 ntBASIC5.79□□□□□ -1.48
CCDC65Q8IXS2 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC65Q8IXS2 AL591623.2-201ENST00000449978 222 ntBASIC5.79□□□□□ -1.48
CCDC65Q8IXS2 AC016724.1-201ENST00000453215 421 ntBASIC5.79□□□□□ -1.48
CCDC65Q8IXS2 Z92846.1-201ENST00000456203 268 ntBASIC5.79□□□□□ -1.48
CCDC65Q8IXS2 AC108161.1-201ENST00000461060 402 ntBASIC5.79□□□□□ -1.48
CCDC65Q8IXS2 AC093890.1-201ENST00000502554 540 ntBASIC5.79□□□□□ -1.48
CCDC65Q8IXS2 GTF2F2P1-201ENST00000511083 675 ntBASIC5.79□□□□□ -1.48
CCDC65Q8IXS2 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC65Q8IXS2 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC65Q8IXS2 SETP1-201ENST00000556014 845 ntBASIC5.79□□□□□ -1.48
CCDC65Q8IXS2 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC65Q8IXS2 AC092944.2-201ENST00000605443 889 ntBASIC5.79□□□□□ -1.48
CCDC65Q8IXS2 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC65Q8IXS2 TMEM30CP-203ENST00000637814 1035 ntBASIC5.79□□□□□ -1.48
CCDC65Q8IXS2 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
CCDC65Q8IXS2 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CCDC65Q8IXS2 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC65Q8IXS2 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CCDC65Q8IXS2 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC65Q8IXS2 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC65Q8IXS2 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC65Q8IXS2 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC65Q8IXS2 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC65Q8IXS2 AL450345.1-202ENST00000605741 3881 ntBASIC5.78□□□□□ -1.48
CCDC65Q8IXS2 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC65Q8IXS2 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC65Q8IXS2 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC65Q8IXS2 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC65Q8IXS2 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
CCDC65Q8IXS2 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC65Q8IXS2 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
CCDC65Q8IXS2 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC65Q8IXS2 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC65Q8IXS2 U3.7-201ENST00000363668 216 ntBASIC5.78□□□□□ -1.48
CCDC65Q8IXS2 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC65Q8IXS2 RPL35AP24-201ENST00000413846 330 ntBASIC5.78□□□□□ -1.48
CCDC65Q8IXS2 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC65Q8IXS2 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CCDC65Q8IXS2 AC046176.1-201ENST00000435260 1170 ntBASIC5.78□□□□□ -1.48
CCDC65Q8IXS2 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC65Q8IXS2 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.78□□□□□ -1.48
CCDC65Q8IXS2 AC011225.1-201ENST00000457751 369 ntBASIC5.78□□□□□ -1.48
CCDC65Q8IXS2 AC069304.1-201ENST00000491593 704 ntBASIC5.78□□□□□ -1.48
CCDC65Q8IXS2 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.78□□□□□ -1.48
CCDC65Q8IXS2 PGAM1P13-201ENST00000507497 754 ntBASIC5.78□□□□□ -1.48
CCDC65Q8IXS2 RPL7L1P4-201ENST00000513004 707 ntBASIC5.78□□□□□ -1.48
CCDC65Q8IXS2 RNU6-513P-201ENST00000516104 104 ntBASIC5.78□□□□□ -1.48
CCDC65Q8IXS2 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.78□□□□□ -1.48
CCDC65Q8IXS2 AC040958.1-201ENST00000561102 201 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms