Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 AL606490.7-201ENST00000433136 191 ntBASIC7.46□□□□□ -1.22
NPAS3Q8IXF0 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC7.46□□□□□ -1.22
NPAS3Q8IXF0 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC7.46□□□□□ -1.22
NPAS3Q8IXF0 VN1R38P-201ENST00000450265 887 ntBASIC7.46□□□□□ -1.22
NPAS3Q8IXF0 FABP3P2-201ENST00000453169 399 ntBASIC7.46□□□□□ -1.22
NPAS3Q8IXF0 CACYBPP2-201ENST00000453625 678 ntBASIC7.46□□□□□ -1.22
NPAS3Q8IXF0 AL033528.1-201ENST00000453780 140 ntBASIC7.46□□□□□ -1.22
NPAS3Q8IXF0 AC117395.2-201ENST00000463122 1128 ntBASIC7.46□□□□□ -1.22
NPAS3Q8IXF0 RN7SL649P-201ENST00000496974 275 ntBASIC7.46□□□□□ -1.22
NPAS3Q8IXF0 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC7.46□□□□□ -1.22
NPAS3Q8IXF0 RNU6-1281P-201ENST00000516223 105 ntBASIC7.46□□□□□ -1.22
NPAS3Q8IXF0 IGHVIII-26-1-201ENST00000520387 250 ntBASIC7.46□□□□□ -1.22
NPAS3Q8IXF0 IGLVI-42-201ENST00000522485 381 ntBASIC7.46□□□□□ -1.22
NPAS3Q8IXF0 AP000662.1-201ENST00000530952 487 ntBASIC7.46□□□□□ -1.22
NPAS3Q8IXF0 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC7.46□□□□□ -1.22
NPAS3Q8IXF0 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC7.46□□□□□ -1.22
NPAS3Q8IXF0 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC7.46□□□□□ -1.22
NPAS3Q8IXF0 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
NPAS3Q8IXF0 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC7.46□□□□□ -1.22
NPAS3Q8IXF0 AL117187.1-201ENST00000555482 181 ntBASIC7.46□□□□□ -1.22
NPAS3Q8IXF0 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC7.46□□□□□ -1.22
NPAS3Q8IXF0 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC7.46□□□□□ -1.22
NPAS3Q8IXF0 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC7.46□□□□□ -1.22
NPAS3Q8IXF0 CYP2C60P-201ENST00000566088 139 ntBASIC7.46□□□□□ -1.22
NPAS3Q8IXF0 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC7.46□□□□□ -1.22
NPAS3Q8IXF0 AC024267.2-201ENST00000582737 417 ntBASIC7.46□□□□□ -1.22
NPAS3Q8IXF0 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
NPAS3Q8IXF0 AC018638.8-201ENST00000588755 281 ntBASIC7.46□□□□□ -1.22
NPAS3Q8IXF0 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC7.46□□□□□ -1.22
NPAS3Q8IXF0 AC008638.3-201ENST00000603341 463 ntBASIC7.46□□□□□ -1.22
NPAS3Q8IXF0 AC005084.1-201ENST00000605160 304 ntBASIC7.46□□□□□ -1.22
NPAS3Q8IXF0 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
NPAS3Q8IXF0 RN7SL126P-201ENST00000616400 299 ntBASIC7.46□□□□□ -1.22
NPAS3Q8IXF0 AL139089.1-201ENST00000620372 975 ntBASIC7.46□□□□□ -1.22
NPAS3Q8IXF0 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC7.46□□□□□ -1.22
NPAS3Q8IXF0 ALB-203ENST00000415165 1483 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
NPAS3Q8IXF0 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC7.46□□□□□ -1.22
NPAS3Q8IXF0 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.22
NPAS3Q8IXF0 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
NPAS3Q8IXF0 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
NPAS3Q8IXF0 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC7.46□□□□□ -1.22
NPAS3Q8IXF0 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC7.46□□□□□ -1.22
NPAS3Q8IXF0 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
NPAS3Q8IXF0 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC7.46□□□□□ -1.22
NPAS3Q8IXF0 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 L1TD1-201ENST00000498273 3849 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 PPIAP22-201ENST00000358455 498 ntBASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 RNU6-1085P-201ENST00000363576 107 ntBASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 RNU6-1062P-201ENST00000383908 107 ntBASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 Y_RNA.474-201ENST00000384341 102 ntBASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 RNU6-1026P-201ENST00000384465 108 ntBASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 SNORD65C-201ENST00000390962 71 ntBASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 AC087752.1-201ENST00000391360 558 ntBASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 GGA1-205ENST00000405147 575 ntTSL 4 BASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 RN7SKP91-201ENST00000410852 288 ntBASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 RPL24P2-201ENST00000421023 475 ntBASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 RPS27AP14-201ENST00000422868 454 ntBASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 PTPN2P1-201ENST00000423212 1072 ntBASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 PSMD10P2-201ENST00000432890 672 ntBASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 RPS24P13-201ENST00000442520 397 ntBASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 PTMAP1-205ENST00000455552 325 ntBASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 BX323845.2-201ENST00000458382 234 ntBASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 AC027575.1-201ENST00000481064 460 ntBASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 Y_RNA.693-201ENST00000516641 110 ntBASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 RNU7-30P-201ENST00000516835 62 ntBASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 RNU6-388P-201ENST00000517012 105 ntBASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 RNU6-389P-201ENST00000517048 105 ntBASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 AC006270.2-201ENST00000578523 652 ntBASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 ZNF561-AS1-208ENST00000592851 782 ntTSL 3 BASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 AC036176.3-201ENST00000602456 418 ntBASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 AC090948.1-201ENST00000607464 549 ntBASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 AL590065.1-201ENST00000603371 4774 ntBASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC7.45□□□□□ -1.22
NPAS3Q8IXF0 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms