Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.77□□□□□ -1.49
VRK3Q8IV63 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
VRK3Q8IV63 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VRK3Q8IV63 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
VRK3Q8IV63 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
VRK3Q8IV63 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VRK3Q8IV63 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
VRK3Q8IV63 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VRK3Q8IV63 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.76□□□□□ -1.49
VRK3Q8IV63 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
VRK3Q8IV63 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VRK3Q8IV63 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VRK3Q8IV63 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC5.76□□□□□ -1.49
VRK3Q8IV63 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
VRK3Q8IV63 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VRK3Q8IV63 SNORD1C-201ENST00000363315 78 ntBASIC5.76□□□□□ -1.49
VRK3Q8IV63 RNA5SP500-201ENST00000364486 119 ntBASIC5.76□□□□□ -1.49
VRK3Q8IV63 SUGT1P2-201ENST00000379452 992 ntBASIC5.76□□□□□ -1.49
VRK3Q8IV63 Z68694.1-201ENST00000413929 841 ntBASIC5.76□□□□□ -1.49
VRK3Q8IV63 USP9YP26-201ENST00000421008 661 ntBASIC5.76□□□□□ -1.49
VRK3Q8IV63 RNF19BPX-201ENST00000426224 625 ntBASIC5.76□□□□□ -1.49
VRK3Q8IV63 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC5.76□□□□□ -1.49
VRK3Q8IV63 PCBP2P1-201ENST00000437262 977 ntBASIC5.76□□□□□ -1.49
VRK3Q8IV63 BX679664.2-201ENST00000439282 283 ntBASIC5.76□□□□□ -1.49
VRK3Q8IV63 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.76□□□□□ -1.49
VRK3Q8IV63 HSFY3P-201ENST00000444242 1191 ntBASIC5.76□□□□□ -1.49
VRK3Q8IV63 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.76□□□□□ -1.49
VRK3Q8IV63 MTND2P4-201ENST00000445034 1004 ntBASIC5.76□□□□□ -1.49
VRK3Q8IV63 HMGN1P2-201ENST00000445197 310 ntBASIC5.76□□□□□ -1.49
VRK3Q8IV63 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC5.76□□□□□ -1.49
VRK3Q8IV63 RPL7P55-201ENST00000450522 746 ntBASIC5.76□□□□□ -1.49
VRK3Q8IV63 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.76□□□□□ -1.49
VRK3Q8IV63 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC5.76□□□□□ -1.49
VRK3Q8IV63 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.76□□□□□ -1.49
VRK3Q8IV63 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VRK3Q8IV63 MTND2P14-201ENST00000482139 351 ntBASIC5.76□□□□□ -1.49
VRK3Q8IV63 RPL21P131-201ENST00000497298 483 ntBASIC5.76□□□□□ -1.49
VRK3Q8IV63 GOLGA5P1-201ENST00000507317 980 ntBASIC5.76□□□□□ -1.49
VRK3Q8IV63 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.76□□□□□ -1.49
VRK3Q8IV63 AC006499.4-201ENST00000510947 694 ntBASIC5.76□□□□□ -1.49
VRK3Q8IV63 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.76□□□□□ -1.49
VRK3Q8IV63 SETP21-201ENST00000514799 892 ntBASIC5.76□□□□□ -1.49
VRK3Q8IV63 SNORA3.4-201ENST00000515969 96 ntBASIC5.76□□□□□ -1.49
VRK3Q8IV63 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.76□□□□□ -1.49
VRK3Q8IV63 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VRK3Q8IV63 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC5.76□□□□□ -1.49
VRK3Q8IV63 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VRK3Q8IV63 WBP1LP3-201ENST00000523033 208 ntBASIC5.76□□□□□ -1.49
VRK3Q8IV63 PCNAP4-201ENST00000532690 730 ntBASIC5.76□□□□□ -1.49
VRK3Q8IV63 AC090424.1-201ENST00000535243 736 ntBASIC5.76□□□□□ -1.49
VRK3Q8IV63 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
VRK3Q8IV63 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC5.76□□□□□ -1.49
VRK3Q8IV63 AC091078.2-201ENST00000557145 559 ntBASIC5.76□□□□□ -1.49
VRK3Q8IV63 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.76□□□□□ -1.49
VRK3Q8IV63 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC5.76□□□□□ -1.49
VRK3Q8IV63 MRPS35P3-201ENST00000603189 709 ntBASIC5.76□□□□□ -1.49
VRK3Q8IV63 AC004987.4-201ENST00000603383 338 ntBASIC5.76□□□□□ -1.49
VRK3Q8IV63 AC107304.1-201ENST00000604229 296 ntBASIC5.76□□□□□ -1.49
VRK3Q8IV63 AC145423.1-201ENST00000605712 336 ntBASIC5.76□□□□□ -1.49
VRK3Q8IV63 AC015849.2-201ENST00000605738 409 ntBASIC5.76□□□□□ -1.49
VRK3Q8IV63 AC067838.1-201ENST00000606064 577 ntBASIC5.76□□□□□ -1.49
VRK3Q8IV63 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.76□□□□□ -1.49
VRK3Q8IV63 AL031658.2-201ENST00000616850 651 ntBASIC5.76□□□□□ -1.49
VRK3Q8IV63 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.76□□□□□ -1.49
VRK3Q8IV63 AL603755.1-201ENST00000619504 163 ntBASIC5.76□□□□□ -1.49
VRK3Q8IV63 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.76□□□□□ -1.49
VRK3Q8IV63 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
VRK3Q8IV63 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.76□□□□□ -1.49
VRK3Q8IV63 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.76□□□□□ -1.49
VRK3Q8IV63 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.76□□□□□ -1.49
VRK3Q8IV63 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
VRK3Q8IV63 MFSD8-219ENST00000641228 2559 ntBASIC5.76□□□□□ -1.49
VRK3Q8IV63 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.76□□□□□ -1.49
VRK3Q8IV63 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.76□□□□□ -1.49
VRK3Q8IV63 CASC19-255ENST00000641733 1385 ntBASIC5.76□□□□□ -1.49
VRK3Q8IV63 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
VRK3Q8IV63 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.76□□□□□ -1.49
VRK3Q8IV63 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
VRK3Q8IV63 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
VRK3Q8IV63 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.76□□□□□ -1.49
VRK3Q8IV63 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VRK3Q8IV63 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.75□□□□□ -1.49
VRK3Q8IV63 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VRK3Q8IV63 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
VRK3Q8IV63 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.75□□□□□ -1.49
VRK3Q8IV63 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VRK3Q8IV63 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.75□□□□□ -1.49
VRK3Q8IV63 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.75□□□□□ -1.49
VRK3Q8IV63 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
VRK3Q8IV63 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.75□□□□□ -1.49
VRK3Q8IV63 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.75□□□□□ -1.49
VRK3Q8IV63 AL359955.1-201ENST00000455242 3275 ntBASIC5.75□□□□□ -1.49
VRK3Q8IV63 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VRK3Q8IV63 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VRK3Q8IV63 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
VRK3Q8IV63 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
VRK3Q8IV63 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VRK3Q8IV63 RNU1-150P-201ENST00000362491 162 ntBASIC5.75□□□□□ -1.49
VRK3Q8IV63 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
VRK3Q8IV63 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms