Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
LRRTM4Q86VH4 CCT8P1-201ENST00000413611 1657 ntBASIC5.64□□□□□ -1.51
LRRTM4Q86VH4 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LRRTM4Q86VH4 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LRRTM4Q86VH4 SNORA64.1-201ENST00000362600 132 ntBASIC5.64□□□□□ -1.51
LRRTM4Q86VH4 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.64□□□□□ -1.51
LRRTM4Q86VH4 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
LRRTM4Q86VH4 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
LRRTM4Q86VH4 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.64□□□□□ -1.51
LRRTM4Q86VH4 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.64□□□□□ -1.51
LRRTM4Q86VH4 RPS26P38-201ENST00000414476 348 ntBASIC5.64□□□□□ -1.51
LRRTM4Q86VH4 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.64□□□□□ -1.51
LRRTM4Q86VH4 OR5M12P-201ENST00000423388 929 ntBASIC5.64□□□□□ -1.51
LRRTM4Q86VH4 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC5.64□□□□□ -1.51
LRRTM4Q86VH4 GAPDHP48-201ENST00000436626 961 ntBASIC5.64□□□□□ -1.51
LRRTM4Q86VH4 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.64□□□□□ -1.51
LRRTM4Q86VH4 RSU1P1-201ENST00000453416 441 ntBASIC5.64□□□□□ -1.51
LRRTM4Q86VH4 AC008379.1-201ENST00000463655 464 ntBASIC5.64□□□□□ -1.51
LRRTM4Q86VH4 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.64□□□□□ -1.51
LRRTM4Q86VH4 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.64□□□□□ -1.51
LRRTM4Q86VH4 AC133963.2-201ENST00000513686 578 ntBASIC5.64□□□□□ -1.51
LRRTM4Q86VH4 SNORA43.3-201ENST00000517240 103 ntBASIC5.64□□□□□ -1.51
LRRTM4Q86VH4 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
LRRTM4Q86VH4 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.64□□□□□ -1.51
LRRTM4Q86VH4 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LRRTM4Q86VH4 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.64□□□□□ -1.51
LRRTM4Q86VH4 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC5.64□□□□□ -1.51
LRRTM4Q86VH4 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.64□□□□□ -1.51
LRRTM4Q86VH4 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.64□□□□□ -1.51
LRRTM4Q86VH4 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.64□□□□□ -1.51
LRRTM4Q86VH4 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.64□□□□□ -1.51
LRRTM4Q86VH4 DPPA2P4-201ENST00000563717 878 ntBASIC5.64□□□□□ -1.51
LRRTM4Q86VH4 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.64□□□□□ -1.51
LRRTM4Q86VH4 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.64□□□□□ -1.51
LRRTM4Q86VH4 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.64□□□□□ -1.51
LRRTM4Q86VH4 AL513327.3-201ENST00000602618 469 ntBASIC5.64□□□□□ -1.51
LRRTM4Q86VH4 AL133481.2-203ENST00000607558 139 ntBASIC5.64□□□□□ -1.51
LRRTM4Q86VH4 AL138960.1-201ENST00000613838 513 ntBASIC5.64□□□□□ -1.51
LRRTM4Q86VH4 AL138955.1-201ENST00000622881 1040 ntBASIC5.64□□□□□ -1.51
LRRTM4Q86VH4 AC007683.2-201ENST00000624681 714 ntBASIC5.64□□□□□ -1.51
LRRTM4Q86VH4 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LRRTM4Q86VH4 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LRRTM4Q86VH4 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LRRTM4Q86VH4 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.64□□□□□ -1.51
LRRTM4Q86VH4 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
LRRTM4Q86VH4 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LRRTM4Q86VH4 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.64□□□□□ -1.51
LRRTM4Q86VH4 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
LRRTM4Q86VH4 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LRRTM4Q86VH4 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LRRTM4Q86VH4 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
LRRTM4Q86VH4 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.63□□□□□ -1.51
LRRTM4Q86VH4 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
LRRTM4Q86VH4 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
LRRTM4Q86VH4 TTC39DP-201ENST00000416781 1688 ntBASIC5.63□□□□□ -1.51
LRRTM4Q86VH4 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
LRRTM4Q86VH4 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
LRRTM4Q86VH4 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LRRTM4Q86VH4 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
LRRTM4Q86VH4 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
LRRTM4Q86VH4 RNA5SP46-201ENST00000362370 120 ntBASIC5.63□□□□□ -1.51
LRRTM4Q86VH4 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.63□□□□□ -1.51
LRRTM4Q86VH4 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.63□□□□□ -1.51
LRRTM4Q86VH4 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.63□□□□□ -1.51
LRRTM4Q86VH4 MIR130A-201ENST00000385274 89 ntBASIC5.63□□□□□ -1.51
LRRTM4Q86VH4 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LRRTM4Q86VH4 AL035405.1-201ENST00000400795 710 ntBASIC5.63□□□□□ -1.51
LRRTM4Q86VH4 AP000357.1-201ENST00000409926 1165 ntBASIC5.63□□□□□ -1.51
LRRTM4Q86VH4 RMRPP5-201ENST00000411156 267 ntBASIC5.63□□□□□ -1.51
LRRTM4Q86VH4 AL158825.1-201ENST00000414735 521 ntBASIC5.63□□□□□ -1.51
LRRTM4Q86VH4 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.63□□□□□ -1.51
LRRTM4Q86VH4 BX664727.1-201ENST00000416024 466 ntBASIC5.63□□□□□ -1.51
LRRTM4Q86VH4 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.63□□□□□ -1.51
LRRTM4Q86VH4 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC5.63□□□□□ -1.51
LRRTM4Q86VH4 RPS4XP16-201ENST00000427198 791 ntBASIC5.63□□□□□ -1.51
LRRTM4Q86VH4 MTCO1P43-201ENST00000431831 488 ntBASIC5.63□□□□□ -1.51
LRRTM4Q86VH4 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.63□□□□□ -1.51
LRRTM4Q86VH4 USP24P1-201ENST00000433802 779 ntBASIC5.63□□□□□ -1.51
LRRTM4Q86VH4 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.63□□□□□ -1.51
LRRTM4Q86VH4 CASP3P1-201ENST00000446037 609 ntBASIC5.63□□□□□ -1.51
LRRTM4Q86VH4 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
LRRTM4Q86VH4 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.63□□□□□ -1.51
LRRTM4Q86VH4 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.63□□□□□ -1.51
LRRTM4Q86VH4 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
LRRTM4Q86VH4 AC087672.1-201ENST00000479876 766 ntBASIC5.63□□□□□ -1.51
LRRTM4Q86VH4 RN7SL273P-201ENST00000481561 299 ntBASIC5.63□□□□□ -1.51
LRRTM4Q86VH4 RPL21P47-201ENST00000483696 477 ntBASIC5.63□□□□□ -1.51
LRRTM4Q86VH4 RPS3AP15-201ENST00000483874 781 ntBASIC5.63□□□□□ -1.51
LRRTM4Q86VH4 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.63□□□□□ -1.51
LRRTM4Q86VH4 PPM1AP1-201ENST00000502740 1135 ntBASIC5.63□□□□□ -1.51
LRRTM4Q86VH4 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.63□□□□□ -1.51
LRRTM4Q86VH4 AC108471.1-201ENST00000513977 287 ntBASIC5.63□□□□□ -1.51
LRRTM4Q86VH4 TMEM97P2-201ENST00000517841 403 ntBASIC5.63□□□□□ -1.51
LRRTM4Q86VH4 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.63□□□□□ -1.51
LRRTM4Q86VH4 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.63□□□□□ -1.51
LRRTM4Q86VH4 AC126615.2-201ENST00000553003 515 ntBASIC5.63□□□□□ -1.51
LRRTM4Q86VH4 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
LRRTM4Q86VH4 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
LRRTM4Q86VH4 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.63□□□□□ -1.51
LRRTM4Q86VH4 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms