Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 RN7SKP28-201ENST00000364770 305 ntBASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 RNA5SP284-201ENST00000384547 118 ntBASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 MIR551A-201ENST00000385042 96 ntBASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 RNU6-1000P-201ENST00000391066 106 ntBASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 MTCO2P8-201ENST00000412213 658 ntBASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 CETN4P-201ENST00000432407 469 ntBASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 SETP8-201ENST00000435341 628 ntBASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 RPL23AP19-201ENST00000436229 369 ntBASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 AC002504.1-201ENST00000438281 691 ntBASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 AC064862.4-201ENST00000442180 334 ntBASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 RPL36AP39-201ENST00000445859 318 ntBASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 IGBP1P4-201ENST00000503202 879 ntBASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 BOLA3P3-201ENST00000505182 232 ntBASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 NRBF2P4-201ENST00000520874 850 ntBASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 AP004609.2-201ENST00000532177 190 ntBASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 LRRC34P1-201ENST00000542742 915 ntBASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 AC079148.1-201ENST00000565944 819 ntBASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 AC010547.6-201ENST00000571789 193 ntBASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 AC005412.1-201ENST00000580812 1049 ntBASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 MIR7853-201ENST00000584820 132 ntBASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 AC040904.1-201ENST00000590850 223 ntBASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 AC073342.3-201ENST00000624211 193 ntBASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 AC019226.2-201ENST00000625973 424 ntBASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
ZNF549Q6P9A3 AL353796.1-201ENST00000561542 3241 ntBASIC5.4□□□□□ -1.54
ZNF549Q6P9A3 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
ZNF549Q6P9A3 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.4□□□□□ -1.54
ZNF549Q6P9A3 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
ZNF549Q6P9A3 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
ZNF549Q6P9A3 AC139426.3-201ENST00000605648 2059 ntBASIC5.4□□□□□ -1.54
ZNF549Q6P9A3 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
ZNF549Q6P9A3 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
ZNF549Q6P9A3 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
ZNF549Q6P9A3 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
ZNF549Q6P9A3 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
ZNF549Q6P9A3 RNU4-39P-201ENST00000362455 127 ntBASIC5.4□□□□□ -1.54
ZNF549Q6P9A3 RNU6-1257P-201ENST00000384625 110 ntBASIC5.4□□□□□ -1.54
ZNF549Q6P9A3 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC5.4□□□□□ -1.54
ZNF549Q6P9A3 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC5.4□□□□□ -1.54
ZNF549Q6P9A3 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC5.4□□□□□ -1.54
ZNF549Q6P9A3 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.4□□□□□ -1.54
ZNF549Q6P9A3 AC090602.1-201ENST00000469695 252 ntBASIC5.4□□□□□ -1.54
ZNF549Q6P9A3 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.4□□□□□ -1.54
ZNF549Q6P9A3 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC5.4□□□□□ -1.54
ZNF549Q6P9A3 RPEP1-201ENST00000504507 658 ntBASIC5.4□□□□□ -1.54
ZNF549Q6P9A3 AC109481.1-201ENST00000509173 282 ntBASIC5.4□□□□□ -1.54
ZNF549Q6P9A3 AC119751.5-201ENST00000514077 770 ntBASIC5.4□□□□□ -1.54
ZNF549Q6P9A3 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.4□□□□□ -1.54
ZNF549Q6P9A3 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
ZNF549Q6P9A3 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.4□□□□□ -1.54
ZNF549Q6P9A3 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.4□□□□□ -1.54
ZNF549Q6P9A3 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
ZNF549Q6P9A3 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.4□□□□□ -1.54
ZNF549Q6P9A3 AC087888.1-201ENST00000550884 1254 ntBASIC5.4□□□□□ -1.54
ZNF549Q6P9A3 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.4□□□□□ -1.54
ZNF549Q6P9A3 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.4□□□□□ -1.54
ZNF549Q6P9A3 AL049872.1-201ENST00000556323 322 ntBASIC5.4□□□□□ -1.54
ZNF549Q6P9A3 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.4□□□□□ -1.54
ZNF549Q6P9A3 RBM22P12-201ENST00000567098 1255 ntBASIC5.4□□□□□ -1.54
ZNF549Q6P9A3 BNIP3P32-201ENST00000600015 554 ntBASIC5.4□□□□□ -1.54
ZNF549Q6P9A3 AL355802.4-201ENST00000607635 548 ntBASIC5.4□□□□□ -1.54
ZNF549Q6P9A3 AC087683.2-201ENST00000611384 326 ntBASIC5.4□□□□□ -1.54
ZNF549Q6P9A3 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms