Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SCN1BQ07699 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
SCN1BQ07699 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
SCN1BQ07699 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SCN1BQ07699 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SCN1BQ07699 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SCN1BQ07699 AL353692.2-201ENST00000407054 335 ntBASIC4.99□□□□□ -1.61
SCN1BQ07699 AC010385.1-201ENST00000412374 256 ntBASIC4.99□□□□□ -1.61
SCN1BQ07699 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC4.99□□□□□ -1.61
SCN1BQ07699 AL035422.1-201ENST00000414193 397 ntBASIC4.99□□□□□ -1.61
SCN1BQ07699 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC4.99□□□□□ -1.61
SCN1BQ07699 AL359885.1-201ENST00000415786 903 ntBASIC4.99□□□□□ -1.61
SCN1BQ07699 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC4.99□□□□□ -1.61
SCN1BQ07699 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.99□□□□□ -1.61
SCN1BQ07699 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.99□□□□□ -1.61
SCN1BQ07699 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC4.99□□□□□ -1.61
SCN1BQ07699 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.99□□□□□ -1.61
SCN1BQ07699 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.99□□□□□ -1.61
SCN1BQ07699 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC4.99□□□□□ -1.61
SCN1BQ07699 AC073909.1-201ENST00000447112 999 ntBASIC4.99□□□□□ -1.61
SCN1BQ07699 RNU6-1218P-201ENST00000458990 108 ntBASIC4.99□□□□□ -1.61
SCN1BQ07699 AC021660.1-201ENST00000465006 554 ntBASIC4.99□□□□□ -1.61
SCN1BQ07699 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.99□□□□□ -1.61
SCN1BQ07699 RPS7P6-201ENST00000485777 579 ntBASIC4.99□□□□□ -1.61
SCN1BQ07699 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.99□□□□□ -1.61
SCN1BQ07699 AC106822.1-201ENST00000502647 526 ntBASIC4.99□□□□□ -1.61
SCN1BQ07699 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.99□□□□□ -1.61
SCN1BQ07699 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.99□□□□□ -1.61
SCN1BQ07699 AC025459.1-201ENST00000504072 156 ntBASIC4.99□□□□□ -1.61
SCN1BQ07699 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.99□□□□□ -1.61
SCN1BQ07699 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC4.99□□□□□ -1.61
SCN1BQ07699 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC4.99□□□□□ -1.61
SCN1BQ07699 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.99□□□□□ -1.61
SCN1BQ07699 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC4.99□□□□□ -1.61
SCN1BQ07699 AP003033.2-201ENST00000528901 805 ntBASIC4.99□□□□□ -1.61
SCN1BQ07699 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.99□□□□□ -1.61
SCN1BQ07699 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.99□□□□□ -1.61
SCN1BQ07699 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SCN1BQ07699 AC121758.1-202ENST00000556917 658 ntBASIC4.99□□□□□ -1.61
SCN1BQ07699 GARSP1-201ENST00000570895 719 ntBASIC4.99□□□□□ -1.61
SCN1BQ07699 MIR4502-201ENST00000580432 81 ntBASIC4.99□□□□□ -1.61
SCN1BQ07699 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC4.99□□□□□ -1.61
SCN1BQ07699 AP005262.1-201ENST00000582646 997 ntBASIC4.99□□□□□ -1.61
SCN1BQ07699 APOC2-205ENST00000592257 444 ntTSL 3 BASIC4.99□□□□□ -1.61
SCN1BQ07699 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC4.99□□□□□ -1.61
SCN1BQ07699 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC4.99□□□□□ -1.61
SCN1BQ07699 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.99□□□□□ -1.61
SCN1BQ07699 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
SCN1BQ07699 AC016957.2-201ENST00000616998 848 ntBASIC4.99□□□□□ -1.61
SCN1BQ07699 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.99□□□□□ -1.61
SCN1BQ07699 AC073488.3-201ENST00000631611 778 ntBASIC4.99□□□□□ -1.61
SCN1BQ07699 HSPD1P11-201ENST00000508643 1702 ntBASIC4.99□□□□□ -1.61
SCN1BQ07699 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SCN1BQ07699 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.99□□□□□ -1.61
SCN1BQ07699 AC093311.1-201ENST00000506586 2021 ntBASIC4.99□□□□□ -1.61
SCN1BQ07699 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SCN1BQ07699 ATP5A1P1-201ENST00000454088 1321 ntBASIC4.98□□□□□ -1.61
SCN1BQ07699 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SCN1BQ07699 PSG10P-201ENST00000501199 1500 ntBASIC4.98□□□□□ -1.61
SCN1BQ07699 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SCN1BQ07699 GNL2P1-201ENST00000451274 2190 ntBASIC4.98□□□□□ -1.61
SCN1BQ07699 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
SCN1BQ07699 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SCN1BQ07699 RNA5SP232-201ENST00000364144 119 ntBASIC4.98□□□□□ -1.61
SCN1BQ07699 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
SCN1BQ07699 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SCN1BQ07699 RNU6-452P-201ENST00000384406 107 ntBASIC4.98□□□□□ -1.61
SCN1BQ07699 RNU6-178P-201ENST00000384631 104 ntBASIC4.98□□□□□ -1.61
SCN1BQ07699 MIR92A2-201ENST00000385299 75 ntBASIC4.98□□□□□ -1.61
SCN1BQ07699 SNORA68.2-201ENST00000391263 128 ntBASIC4.98□□□□□ -1.61
SCN1BQ07699 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SCN1BQ07699 AC105402.1-201ENST00000413336 545 ntBASIC4.98□□□□□ -1.61
SCN1BQ07699 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC4.98□□□□□ -1.61
SCN1BQ07699 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC4.98□□□□□ -1.61
SCN1BQ07699 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC4.98□□□□□ -1.61
SCN1BQ07699 AL513321.1-201ENST00000441175 761 ntBASIC4.98□□□□□ -1.61
SCN1BQ07699 EIF5AP4-201ENST00000441206 465 ntBASIC4.98□□□□□ -1.61
SCN1BQ07699 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.98□□□□□ -1.61
SCN1BQ07699 RPS7P3-201ENST00000443360 580 ntBASIC4.98□□□□□ -1.61
SCN1BQ07699 RPL6P30-201ENST00000443382 862 ntBASIC4.98□□□□□ -1.61
SCN1BQ07699 EEF1B2P3-201ENST00000447718 678 ntBASIC4.98□□□□□ -1.61
SCN1BQ07699 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC4.98□□□□□ -1.61
SCN1BQ07699 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.98□□□□□ -1.61
SCN1BQ07699 AC004129.2-201ENST00000457229 287 ntBASIC4.98□□□□□ -1.61
SCN1BQ07699 AC245028.2-201ENST00000458673 253 ntBASIC4.98□□□□□ -1.61
SCN1BQ07699 AC098818.1-201ENST00000478593 252 ntBASIC4.98□□□□□ -1.61
SCN1BQ07699 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC4.98□□□□□ -1.61
SCN1BQ07699 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.98□□□□□ -1.61
SCN1BQ07699 RPS27AP16-201ENST00000492222 470 ntBASIC4.98□□□□□ -1.61
SCN1BQ07699 AC016559.2-201ENST00000510759 359 ntBASIC4.98□□□□□ -1.61
SCN1BQ07699 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC4.98□□□□□ -1.61
SCN1BQ07699 IGHVIII-76-1-201ENST00000523776 286 ntBASIC4.98□□□□□ -1.61
SCN1BQ07699 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC4.98□□□□□ -1.61
SCN1BQ07699 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC4.98□□□□□ -1.61
SCN1BQ07699 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.98□□□□□ -1.61
SCN1BQ07699 AL512310.9-201ENST00000553311 948 ntBASIC4.98□□□□□ -1.61
SCN1BQ07699 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.98□□□□□ -1.61
SCN1BQ07699 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC4.98□□□□□ -1.61
SCN1BQ07699 STARD6-202ENST00000577499 696 ntTSL 2 BASIC4.98□□□□□ -1.61
SCN1BQ07699 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms