Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5□□□□□ -1.61
CHRNB3Q05901 AC002504.1-201ENST00000438281 691 ntBASIC5□□□□□ -1.61
CHRNB3Q05901 GAPDHP58-201ENST00000438477 1006 ntBASIC5□□□□□ -1.61
CHRNB3Q05901 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5□□□□□ -1.61
CHRNB3Q05901 AL157385.1-201ENST00000446973 268 ntBASIC5□□□□□ -1.61
CHRNB3Q05901 AC074386.1-201ENST00000476560 767 ntBASIC5□□□□□ -1.61
CHRNB3Q05901 RPL7P41-201ENST00000485823 957 ntBASIC5□□□□□ -1.61
CHRNB3Q05901 RN7SL814P-201ENST00000487715 300 ntBASIC5□□□□□ -1.61
CHRNB3Q05901 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5□□□□□ -1.61
CHRNB3Q05901 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5□□□□□ -1.61
CHRNB3Q05901 MTND6P2-201ENST00000512226 524 ntBASIC5□□□□□ -1.61
CHRNB3Q05901 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5□□□□□ -1.61
CHRNB3Q05901 MRPS16P1-201ENST00000523462 412 ntBASIC5□□□□□ -1.61
CHRNB3Q05901 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5□□□□□ -1.61
CHRNB3Q05901 AC027544.3-201ENST00000535082 757 ntBASIC5□□□□□ -1.61
CHRNB3Q05901 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5□□□□□ -1.61
CHRNB3Q05901 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5□□□□□ -1.61
CHRNB3Q05901 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5□□□□□ -1.61
CHRNB3Q05901 AC127381.1-201ENST00000555979 939 ntBASIC5□□□□□ -1.61
CHRNB3Q05901 AC234775.3-201ENST00000564612 656 ntBASIC5□□□□□ -1.61
CHRNB3Q05901 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5□□□□□ -1.61
CHRNB3Q05901 MIR4505-201ENST00000582238 73 ntBASIC5□□□□□ -1.61
CHRNB3Q05901 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5□□□□□ -1.61
CHRNB3Q05901 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5□□□□□ -1.61
CHRNB3Q05901 AL122125.1-201ENST00000616999 600 ntBASIC5□□□□□ -1.61
CHRNB3Q05901 BX005214.3-202ENST00000619809 325 ntBASIC5□□□□□ -1.61
CHRNB3Q05901 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
CHRNB3Q05901 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CHRNB3Q05901 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5□□□□□ -1.61
CHRNB3Q05901 TOPORSLP1-201ENST00000467693 2102 ntBASIC5□□□□□ -1.61
CHRNB3Q05901 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5□□□□□ -1.61
CHRNB3Q05901 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CHRNB3Q05901 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CHRNB3Q05901 AL731566.1-201ENST00000620490 1937 ntBASIC4.99□□□□□ -1.61
CHRNB3Q05901 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CHRNB3Q05901 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.99□□□□□ -1.61
CHRNB3Q05901 AC023421.1-201ENST00000590535 1785 ntBASIC4.99□□□□□ -1.61
CHRNB3Q05901 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
CHRNB3Q05901 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CHRNB3Q05901 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CHRNB3Q05901 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.99□□□□□ -1.61
CHRNB3Q05901 RNA5SP131-201ENST00000365452 119 ntBASIC4.99□□□□□ -1.61
CHRNB3Q05901 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CHRNB3Q05901 AC005522.1-201ENST00000395416 346 ntBASIC4.99□□□□□ -1.61
CHRNB3Q05901 AC007068.1-201ENST00000396690 844 ntBASIC4.99□□□□□ -1.61
CHRNB3Q05901 AC079355.1-201ENST00000421770 223 ntBASIC4.99□□□□□ -1.61
CHRNB3Q05901 NANOGP4-201ENST00000427230 913 ntBASIC4.99□□□□□ -1.61
CHRNB3Q05901 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.99□□□□□ -1.61
CHRNB3Q05901 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.99□□□□□ -1.61
CHRNB3Q05901 DNAJB5P1-201ENST00000454004 806 ntBASIC4.99□□□□□ -1.61
CHRNB3Q05901 AC104849.1-201ENST00000462623 405 ntBASIC4.99□□□□□ -1.61
CHRNB3Q05901 CBX1P5-201ENST00000475330 559 ntBASIC4.99□□□□□ -1.61
CHRNB3Q05901 BNIP3P1-201ENST00000547295 580 ntBASIC4.99□□□□□ -1.61
CHRNB3Q05901 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.99□□□□□ -1.61
CHRNB3Q05901 AC015802.2-201ENST00000589690 189 ntBASIC4.99□□□□□ -1.61
CHRNB3Q05901 FO393422.1-201ENST00000603908 708 ntBASIC4.99□□□□□ -1.61
CHRNB3Q05901 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.99□□□□□ -1.61
CHRNB3Q05901 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.99□□□□□ -1.61
CHRNB3Q05901 AC073869.10-201ENST00000642016 354 ntBASIC4.99□□□□□ -1.61
CHRNB3Q05901 TCP1P3-201ENST00000414406 1498 ntBASIC4.99□□□□□ -1.61
CHRNB3Q05901 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CHRNB3Q05901 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.99□□□□□ -1.61
CHRNB3Q05901 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.99□□□□□ -1.61
CHRNB3Q05901 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CHRNB3Q05901 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CHRNB3Q05901 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
CHRNB3Q05901 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
CHRNB3Q05901 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.98□□□□□ -1.61
CHRNB3Q05901 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.98□□□□□ -1.61
CHRNB3Q05901 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CHRNB3Q05901 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
CHRNB3Q05901 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CHRNB3Q05901 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
CHRNB3Q05901 LINC01963-201ENST00000562038 3148 ntBASIC4.98□□□□□ -1.61
CHRNB3Q05901 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CHRNB3Q05901 RNA5SP223-201ENST00000365174 120 ntBASIC4.98□□□□□ -1.61
CHRNB3Q05901 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC4.98□□□□□ -1.61
CHRNB3Q05901 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.98□□□□□ -1.61
CHRNB3Q05901 HMGB1P20-201ENST00000402555 677 ntBASIC4.98□□□□□ -1.61
CHRNB3Q05901 SNORA79B-201ENST00000410557 148 ntBASIC4.98□□□□□ -1.61
CHRNB3Q05901 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.98□□□□□ -1.61
CHRNB3Q05901 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.98□□□□□ -1.61
CHRNB3Q05901 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.98□□□□□ -1.61
CHRNB3Q05901 NFYAP1-201ENST00000431953 972 ntBASIC4.98□□□□□ -1.61
CHRNB3Q05901 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.98□□□□□ -1.61
CHRNB3Q05901 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC4.98□□□□□ -1.61
CHRNB3Q05901 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.98□□□□□ -1.61
CHRNB3Q05901 OR6D1P-201ENST00000436165 939 ntBASIC4.98□□□□□ -1.61
CHRNB3Q05901 Z84478.1-201ENST00000438230 1219 ntBASIC4.98□□□□□ -1.61
CHRNB3Q05901 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.98□□□□□ -1.61
CHRNB3Q05901 BX842559.2-201ENST00000451418 605 ntBASIC4.98□□□□□ -1.61
CHRNB3Q05901 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.98□□□□□ -1.61
CHRNB3Q05901 AP000547.1-201ENST00000454360 617 ntBASIC4.98□□□□□ -1.61
CHRNB3Q05901 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
CHRNB3Q05901 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.98□□□□□ -1.61
CHRNB3Q05901 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.98□□□□□ -1.61
CHRNB3Q05901 RFPL4AP3-201ENST00000515267 345 ntBASIC4.98□□□□□ -1.61
CHRNB3Q05901 RNU6-615P-201ENST00000516065 106 ntBASIC4.98□□□□□ -1.61
CHRNB3Q05901 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.98□□□□□ -1.61
CHRNB3Q05901 AC068993.1-201ENST00000546724 589 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms