Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 AC023421.1-201ENST00000590535 1785 ntBASIC5.96□□□□□ -1.46
UBE3AQ05086 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
UBE3AQ05086 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
UBE3AQ05086 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
UBE3AQ05086 HSPD1P8-201ENST00000400121 1658 ntBASIC5.96□□□□□ -1.46
UBE3AQ05086 RPL23P2-201ENST00000320371 421 ntBASIC5.96□□□□□ -1.46
UBE3AQ05086 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
UBE3AQ05086 RNA5SP339-201ENST00000390987 122 ntBASIC5.96□□□□□ -1.46
UBE3AQ05086 AL589647.1-201ENST00000402485 466 ntBASIC5.96□□□□□ -1.46
UBE3AQ05086 NPM1P37-201ENST00000403105 874 ntBASIC5.96□□□□□ -1.46
UBE3AQ05086 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.96□□□□□ -1.46
UBE3AQ05086 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.96□□□□□ -1.46
UBE3AQ05086 H2AFZP6-201ENST00000444403 394 ntBASIC5.96□□□□□ -1.46
UBE3AQ05086 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.96□□□□□ -1.46
UBE3AQ05086 AC105399.1-202ENST00000447303 205 ntBASIC5.96□□□□□ -1.46
UBE3AQ05086 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
UBE3AQ05086 ZNF736P6Y-201ENST00000447526 1213 ntBASIC5.96□□□□□ -1.46
UBE3AQ05086 SNRPCP2-201ENST00000504370 475 ntBASIC5.96□□□□□ -1.46
UBE3AQ05086 RPEP1-201ENST00000504507 658 ntBASIC5.96□□□□□ -1.46
UBE3AQ05086 AC010468.3-201ENST00000508225 458 ntBASIC5.96□□□□□ -1.46
UBE3AQ05086 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.96□□□□□ -1.46
UBE3AQ05086 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.96□□□□□ -1.46
UBE3AQ05086 AC027338.1-201ENST00000514840 825 ntBASIC5.96□□□□□ -1.46
UBE3AQ05086 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.96□□□□□ -1.46
UBE3AQ05086 AC244502.2-201ENST00000543361 851 ntBASIC5.96□□□□□ -1.46
UBE3AQ05086 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
UBE3AQ05086 AC006115.2-201ENST00000596823 202 ntBASIC5.96□□□□□ -1.46
UBE3AQ05086 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.96□□□□□ -1.46
UBE3AQ05086 MIR6748-201ENST00000610433 71 ntBASIC5.96□□□□□ -1.46
UBE3AQ05086 AC025574.2-201ENST00000615621 514 ntBASIC5.96□□□□□ -1.46
UBE3AQ05086 AL445493.3-201ENST00000619568 477 ntBASIC5.96□□□□□ -1.46
UBE3AQ05086 AC073342.3-201ENST00000624211 193 ntBASIC5.96□□□□□ -1.46
UBE3AQ05086 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.96□□□□□ -1.46
UBE3AQ05086 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
UBE3AQ05086 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
UBE3AQ05086 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
UBE3AQ05086 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
UBE3AQ05086 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
UBE3AQ05086 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.95□□□□□ -1.46
UBE3AQ05086 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.95□□□□□ -1.46
UBE3AQ05086 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
UBE3AQ05086 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.95□□□□□ -1.46
UBE3AQ05086 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.95□□□□□ -1.46
UBE3AQ05086 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
UBE3AQ05086 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.95□□□□□ -1.46
UBE3AQ05086 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
UBE3AQ05086 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
UBE3AQ05086 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.95□□□□□ -1.46
UBE3AQ05086 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
UBE3AQ05086 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.95□□□□□ -1.46
UBE3AQ05086 SNORA67-201ENST00000384423 137 ntBASIC5.95□□□□□ -1.46
UBE3AQ05086 RNU6-1320P-201ENST00000390838 107 ntBASIC5.95□□□□□ -1.46
UBE3AQ05086 RNU6-1269P-201ENST00000391139 107 ntBASIC5.95□□□□□ -1.46
UBE3AQ05086 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
UBE3AQ05086 AL360271.1-201ENST00000395679 510 ntBASIC5.95□□□□□ -1.46
UBE3AQ05086 Y_RNA.625-201ENST00000411256 107 ntBASIC5.95□□□□□ -1.46
UBE3AQ05086 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.95□□□□□ -1.46
UBE3AQ05086 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.95□□□□□ -1.46
UBE3AQ05086 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
UBE3AQ05086 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.95□□□□□ -1.46
UBE3AQ05086 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
UBE3AQ05086 AC009963.4-201ENST00000448535 339 ntBASIC5.95□□□□□ -1.46
UBE3AQ05086 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.95□□□□□ -1.46
UBE3AQ05086 AL389915.2-201ENST00000454576 441 ntBASIC5.95□□□□□ -1.46
UBE3AQ05086 RNU6-599P-201ENST00000459383 107 ntBASIC5.95□□□□□ -1.46
UBE3AQ05086 RNU6-1193P-201ENST00000459461 107 ntBASIC5.95□□□□□ -1.46
UBE3AQ05086 AC079080.1-201ENST00000479841 822 ntBASIC5.95□□□□□ -1.46
UBE3AQ05086 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
UBE3AQ05086 RN7SKP66-201ENST00000516681 231 ntBASIC5.95□□□□□ -1.46
UBE3AQ05086 AC103833.1-201ENST00000517442 172 ntBASIC5.95□□□□□ -1.46
UBE3AQ05086 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.95□□□□□ -1.46
UBE3AQ05086 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.95□□□□□ -1.46
UBE3AQ05086 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.95□□□□□ -1.46
UBE3AQ05086 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
UBE3AQ05086 CR383656.14-201ENST00000551951 406 ntBASIC5.95□□□□□ -1.46
UBE3AQ05086 AGGF1P7-201ENST00000562369 913 ntBASIC5.95□□□□□ -1.46
UBE3AQ05086 AC079148.1-201ENST00000565944 819 ntBASIC5.95□□□□□ -1.46
UBE3AQ05086 AC233266.2-201ENST00000567067 528 ntBASIC5.95□□□□□ -1.46
UBE3AQ05086 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.95□□□□□ -1.46
UBE3AQ05086 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.95□□□□□ -1.46
UBE3AQ05086 AC135178.6-201ENST00000605314 398 ntBASIC5.95□□□□□ -1.46
UBE3AQ05086 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.95□□□□□ -1.46
UBE3AQ05086 AC084824.5-201ENST00000612009 413 ntBASIC5.95□□□□□ -1.46
UBE3AQ05086 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
UBE3AQ05086 RNU6-368P-201ENST00000620928 107 ntBASIC5.95□□□□□ -1.46
UBE3AQ05086 RNU6-538P-201ENST00000622329 107 ntBASIC5.95□□□□□ -1.46
UBE3AQ05086 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.95□□□□□ -1.46
UBE3AQ05086 AC074101.1-201ENST00000637861 241 ntBASIC5.95□□□□□ -1.46
UBE3AQ05086 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.95□□□□□ -1.46
UBE3AQ05086 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.95□□□□□ -1.46
UBE3AQ05086 HSPA8P18-201ENST00000439846 1928 ntBASIC5.95□□□□□ -1.46
UBE3AQ05086 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
UBE3AQ05086 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
UBE3AQ05086 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
UBE3AQ05086 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
UBE3AQ05086 AC015799.1-201ENST00000622996 3122 ntBASIC5.94□□□□□ -1.46
UBE3AQ05086 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.94□□□□□ -1.46
UBE3AQ05086 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
UBE3AQ05086 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
UBE3AQ05086 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 210.2 ms