Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HIST1H1AQ02539 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC4.06□□□□□ -1.76
HIST1H1AQ02539 AC107977.1-201ENST00000355745 939 ntBASIC4.06□□□□□ -1.76
HIST1H1AQ02539 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC4.06□□□□□ -1.76
HIST1H1AQ02539 AC099535.1-201ENST00000408928 371 ntBASIC4.06□□□□□ -1.76
HIST1H1AQ02539 HSPE1P27-201ENST00000430808 296 ntBASIC4.06□□□□□ -1.76
HIST1H1AQ02539 Z84478.1-201ENST00000438230 1219 ntBASIC4.06□□□□□ -1.76
HIST1H1AQ02539 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.06□□□□□ -1.76
HIST1H1AQ02539 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.06□□□□□ -1.76
HIST1H1AQ02539 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.06□□□□□ -1.76
HIST1H1AQ02539 AL031584.1-201ENST00000447169 754 ntBASIC4.06□□□□□ -1.76
HIST1H1AQ02539 AL450023.1-201ENST00000450868 751 ntBASIC4.06□□□□□ -1.76
HIST1H1AQ02539 LDHBP2-201ENST00000456969 1005 ntBASIC4.06□□□□□ -1.76
HIST1H1AQ02539 AC011225.1-201ENST00000457751 369 ntBASIC4.06□□□□□ -1.76
HIST1H1AQ02539 ARL4AP1-201ENST00000503220 705 ntBASIC4.06□□□□□ -1.76
HIST1H1AQ02539 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.06□□□□□ -1.76
HIST1H1AQ02539 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC4.06□□□□□ -1.76
HIST1H1AQ02539 OR8G3P-201ENST00000533406 921 ntBASIC4.06□□□□□ -1.76
HIST1H1AQ02539 AC107958.1-201ENST00000556576 290 ntBASIC4.06□□□□□ -1.76
HIST1H1AQ02539 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.06□□□□□ -1.76
HIST1H1AQ02539 AC134669.1-201ENST00000581275 672 ntBASIC4.06□□□□□ -1.76
HIST1H1AQ02539 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC4.06□□□□□ -1.76
HIST1H1AQ02539 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.06□□□□□ -1.76
HIST1H1AQ02539 AL499605.1-201ENST00000604628 403 ntBASIC4.06□□□□□ -1.76
HIST1H1AQ02539 AC109583.2-201ENST00000617367 129 ntBASIC4.06□□□□□ -1.76
HIST1H1AQ02539 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC4.06□□□□□ -1.76
HIST1H1AQ02539 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC4.06□□□□□ -1.76
HIST1H1AQ02539 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC4.06□□□□□ -1.76
HIST1H1AQ02539 MAPK10-320ENST00000641462 6696 ntBASIC4.06□□□□□ -1.76
HIST1H1AQ02539 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
HIST1H1AQ02539 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HIST1H1AQ02539 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
HIST1H1AQ02539 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.06□□□□□ -1.76
HIST1H1AQ02539 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.06□□□□□ -1.76
HIST1H1AQ02539 AC091305.2-201ENST00000624049 1576 ntBASIC4.06□□□□□ -1.76
HIST1H1AQ02539 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
HIST1H1AQ02539 DDX18P3-201ENST00000404856 2007 ntBASIC4.05□□□□□ -1.76
HIST1H1AQ02539 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
HIST1H1AQ02539 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
HIST1H1AQ02539 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HIST1H1AQ02539 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HIST1H1AQ02539 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
HIST1H1AQ02539 AC092111.2-201ENST00000611627 1414 ntBASIC4.05□□□□□ -1.76
HIST1H1AQ02539 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
HIST1H1AQ02539 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HIST1H1AQ02539 NR1H5P-201ENST00000452683 1377 ntBASIC4.05□□□□□ -1.76
HIST1H1AQ02539 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
HIST1H1AQ02539 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HIST1H1AQ02539 RNA5SP510-201ENST00000364697 99 ntBASIC4.05□□□□□ -1.76
HIST1H1AQ02539 RN7SKP153-201ENST00000365026 316 ntBASIC4.05□□□□□ -1.76
HIST1H1AQ02539 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC4.05□□□□□ -1.76
HIST1H1AQ02539 CXADRP1-201ENST00000398098 1095 ntBASIC4.05□□□□□ -1.76
HIST1H1AQ02539 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.05□□□□□ -1.76
HIST1H1AQ02539 LYPLA1P3-201ENST00000402650 695 ntBASIC4.05□□□□□ -1.76
HIST1H1AQ02539 RN7SKP125-201ENST00000410481 302 ntBASIC4.05□□□□□ -1.76
HIST1H1AQ02539 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.05□□□□□ -1.76
HIST1H1AQ02539 Z93019.1-201ENST00000416450 973 ntBASIC4.05□□□□□ -1.76
HIST1H1AQ02539 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HIST1H1AQ02539 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.05□□□□□ -1.76
HIST1H1AQ02539 IPPKP1-201ENST00000422501 768 ntBASIC4.05□□□□□ -1.76
HIST1H1AQ02539 OR2AH1P-201ENST00000425717 928 ntBASIC4.05□□□□□ -1.76
HIST1H1AQ02539 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.05□□□□□ -1.76
HIST1H1AQ02539 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.05□□□□□ -1.76
HIST1H1AQ02539 RPL12P17-201ENST00000432393 498 ntBASIC4.05□□□□□ -1.76
HIST1H1AQ02539 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC4.05□□□□□ -1.76
HIST1H1AQ02539 FMO7P-201ENST00000436045 768 ntBASIC4.05□□□□□ -1.76
HIST1H1AQ02539 HMGN1P2-201ENST00000445197 310 ntBASIC4.05□□□□□ -1.76
HIST1H1AQ02539 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.05□□□□□ -1.76
HIST1H1AQ02539 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.05□□□□□ -1.76
HIST1H1AQ02539 AC094085.1-201ENST00000468914 584 ntBASIC4.05□□□□□ -1.76
HIST1H1AQ02539 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC4.05□□□□□ -1.76
HIST1H1AQ02539 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.05□□□□□ -1.76
HIST1H1AQ02539 PFN1P8-201ENST00000497012 543 ntBASIC4.05□□□□□ -1.76
HIST1H1AQ02539 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC4.05□□□□□ -1.76
HIST1H1AQ02539 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.05□□□□□ -1.76
HIST1H1AQ02539 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC4.05□□□□□ -1.76
HIST1H1AQ02539 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HIST1H1AQ02539 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.05□□□□□ -1.76
HIST1H1AQ02539 AC112191.2-201ENST00000522428 333 ntBASIC4.05□□□□□ -1.76
HIST1H1AQ02539 AC027369.5-201ENST00000533838 755 ntBASIC4.05□□□□□ -1.76
HIST1H1AQ02539 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.05□□□□□ -1.76
HIST1H1AQ02539 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.05□□□□□ -1.76
HIST1H1AQ02539 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC4.05□□□□□ -1.76
HIST1H1AQ02539 AL118522.2-201ENST00000616045 615 ntBASIC4.05□□□□□ -1.76
HIST1H1AQ02539 CXADRP3-202ENST00000617265 1100 ntBASIC4.05□□□□□ -1.76
HIST1H1AQ02539 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.05□□□□□ -1.76
HIST1H1AQ02539 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.05□□□□□ -1.76
HIST1H1AQ02539 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HIST1H1AQ02539 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.05□□□□□ -1.76
HIST1H1AQ02539 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
HIST1H1AQ02539 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HIST1H1AQ02539 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.05□□□□□ -1.76
HIST1H1AQ02539 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.05□□□□□ -1.76
HIST1H1AQ02539 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
HIST1H1AQ02539 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
HIST1H1AQ02539 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
HIST1H1AQ02539 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
HIST1H1AQ02539 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
HIST1H1AQ02539 RNA5SP46-201ENST00000362370 120 ntBASIC4.04□□□□□ -1.76
HIST1H1AQ02539 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms