Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC104115.2-201ENST00000523026 687 ntBASIC4.63□□□□□ -1.67
CX3CL1P78423 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC4.63□□□□□ -1.67
CX3CL1P78423 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.63□□□□□ -1.67
CX3CL1P78423 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC4.63□□□□□ -1.67
CX3CL1P78423 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.63□□□□□ -1.67
CX3CL1P78423 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC4.63□□□□□ -1.67
CX3CL1P78423 AGGF1P9-201ENST00000561884 913 ntBASIC4.63□□□□□ -1.67
CX3CL1P78423 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CX3CL1P78423 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC4.63□□□□□ -1.67
CX3CL1P78423 AL163952.1-202ENST00000569625 600 ntBASIC4.63□□□□□ -1.67
CX3CL1P78423 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.63□□□□□ -1.67
CX3CL1P78423 AC126365.2-201ENST00000580630 379 ntBASIC4.63□□□□□ -1.67
CX3CL1P78423 AC079315.1-201ENST00000602952 623 ntBASIC4.63□□□□□ -1.67
CX3CL1P78423 FAM27E4-201ENST00000605259 342 ntBASIC4.63□□□□□ -1.67
CX3CL1P78423 AC008759.3-201ENST00000613300 508 ntBASIC4.63□□□□□ -1.67
CX3CL1P78423 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CX3CL1P78423 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CX3CL1P78423 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
CX3CL1P78423 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CX3CL1P78423 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC4.63□□□□□ -1.67
CX3CL1P78423 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CX3CL1P78423 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC4.63□□□□□ -1.67
CX3CL1P78423 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
CX3CL1P78423 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CX3CL1P78423 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CX3CL1P78423 RBPJP2-201ENST00000618187 1444 ntBASIC4.63□□□□□ -1.67
CX3CL1P78423 MFSD8-219ENST00000641228 2559 ntBASIC4.62□□□□□ -1.67
CX3CL1P78423 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC4.62□□□□□ -1.67
CX3CL1P78423 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC4.62□□□□□ -1.67
CX3CL1P78423 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
CX3CL1P78423 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC4.62□□□□□ -1.67
CX3CL1P78423 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CX3CL1P78423 VPS35P1-201ENST00000563400 1518 ntBASIC4.62□□□□□ -1.67
CX3CL1P78423 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CX3CL1P78423 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CX3CL1P78423 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CX3CL1P78423 CPS1-IT1-201ENST00000628368 2306 ntBASIC4.62□□□□□ -1.67
CX3CL1P78423 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
CX3CL1P78423 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC4.62□□□□□ -1.67
CX3CL1P78423 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CX3CL1P78423 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC4.62□□□□□ -1.67
CX3CL1P78423 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CX3CL1P78423 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC4.62□□□□□ -1.67
CX3CL1P78423 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.62□□□□□ -1.67
CX3CL1P78423 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CX3CL1P78423 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC4.62□□□□□ -1.67
CX3CL1P78423 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CX3CL1P78423 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.62□□□□□ -1.67
CX3CL1P78423 TMSB4XP2-201ENST00000335179 210 ntBASIC4.62□□□□□ -1.67
CX3CL1P78423 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CX3CL1P78423 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CX3CL1P78423 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CX3CL1P78423 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.62□□□□□ -1.67
CX3CL1P78423 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.62□□□□□ -1.67
CX3CL1P78423 RNU6-354P-201ENST00000383862 107 ntBASIC4.62□□□□□ -1.67
CX3CL1P78423 RNU6-610P-201ENST00000384264 107 ntBASIC4.62□□□□□ -1.67
CX3CL1P78423 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
CX3CL1P78423 RPS27AP11-201ENST00000402798 447 ntBASIC4.62□□□□□ -1.67
CX3CL1P78423 RN7SKP29-201ENST00000410957 272 ntBASIC4.62□□□□□ -1.67
CX3CL1P78423 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC4.62□□□□□ -1.67
CX3CL1P78423 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CX3CL1P78423 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CX3CL1P78423 CRIP1P1-201ENST00000427567 185 ntBASIC4.62□□□□□ -1.67
CX3CL1P78423 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC4.62□□□□□ -1.67
CX3CL1P78423 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC4.62□□□□□ -1.67
CX3CL1P78423 CYCSP11-201ENST00000436426 315 ntBASIC4.62□□□□□ -1.67
CX3CL1P78423 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC4.62□□□□□ -1.67
CX3CL1P78423 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC4.62□□□□□ -1.67
CX3CL1P78423 MED28P3-201ENST00000444288 531 ntBASIC4.62□□□□□ -1.67
CX3CL1P78423 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.62□□□□□ -1.67
CX3CL1P78423 AC023271.1-201ENST00000445936 1090 ntBASIC4.62□□□□□ -1.67
CX3CL1P78423 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC4.62□□□□□ -1.67
CX3CL1P78423 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.62□□□□□ -1.67
CX3CL1P78423 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.62□□□□□ -1.67
CX3CL1P78423 AL157777.1-201ENST00000468100 304 ntBASIC4.62□□□□□ -1.67
CX3CL1P78423 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CX3CL1P78423 HAUS1P1-201ENST00000505275 832 ntBASIC4.62□□□□□ -1.67
CX3CL1P78423 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC4.62□□□□□ -1.67
CX3CL1P78423 IMPA1P1-201ENST00000510718 842 ntBASIC4.62□□□□□ -1.67
CX3CL1P78423 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.62□□□□□ -1.67
CX3CL1P78423 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC4.62□□□□□ -1.67
CX3CL1P78423 AP004609.2-201ENST00000532177 190 ntBASIC4.62□□□□□ -1.67
CX3CL1P78423 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.62□□□□□ -1.67
CX3CL1P78423 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC4.62□□□□□ -1.67
CX3CL1P78423 AC106730.2-201ENST00000566641 540 ntBASIC4.62□□□□□ -1.67
CX3CL1P78423 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC4.62□□□□□ -1.67
CX3CL1P78423 AC124283.4-201ENST00000581815 456 ntBASIC4.62□□□□□ -1.67
CX3CL1P78423 AL513327.3-201ENST00000602618 469 ntBASIC4.62□□□□□ -1.67
CX3CL1P78423 AL138895.2-201ENST00000603019 178 ntBASIC4.62□□□□□ -1.67
CX3CL1P78423 AL499605.1-201ENST00000604628 403 ntBASIC4.62□□□□□ -1.67
CX3CL1P78423 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.62□□□□□ -1.67
CX3CL1P78423 AL133481.2-203ENST00000607558 139 ntBASIC4.62□□□□□ -1.67
CX3CL1P78423 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC4.62□□□□□ -1.67
CX3CL1P78423 AC104763.3-201ENST00000613765 618 ntBASIC4.62□□□□□ -1.67
CX3CL1P78423 AC145207.9-201ENST00000623802 325 ntBASIC4.62□□□□□ -1.67
CX3CL1P78423 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC4.62□□□□□ -1.67
CX3CL1P78423 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC4.62□□□□□ -1.67
CX3CL1P78423 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC4.62□□□□□ -1.67
CX3CL1P78423 ATM-229ENST00000639953 587 ntTSL 5 BASIC4.62□□□□□ -1.67
CX3CL1P78423 OR8A1-204ENST00000642111 1145 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms