Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AK4P6-201ENST00000505168 528 ntBASIC5.8□□□□□ -1.48
HDAC4P56524 PCNAP1-201ENST00000505363 709 ntBASIC5.8□□□□□ -1.48
HDAC4P56524 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.8□□□□□ -1.48
HDAC4P56524 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.8□□□□□ -1.48
HDAC4P56524 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.8□□□□□ -1.48
HDAC4P56524 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.8□□□□□ -1.48
HDAC4P56524 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.8□□□□□ -1.48
HDAC4P56524 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC5.8□□□□□ -1.48
HDAC4P56524 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.8□□□□□ -1.48
HDAC4P56524 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HDAC4P56524 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.8□□□□□ -1.48
HDAC4P56524 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.8□□□□□ -1.48
HDAC4P56524 AC009237.13-201ENST00000603193 276 ntBASIC5.8□□□□□ -1.48
HDAC4P56524 PPATP2-201ENST00000605635 508 ntBASIC5.8□□□□□ -1.48
HDAC4P56524 AC016542.1-201ENST00000608259 493 ntBASIC5.8□□□□□ -1.48
HDAC4P56524 AC015922.4-201ENST00000612568 690 ntBASIC5.8□□□□□ -1.48
HDAC4P56524 AC015660.5-201ENST00000623238 564 ntBASIC5.8□□□□□ -1.48
HDAC4P56524 CU639417.4-201ENST00000623928 207 ntBASIC5.8□□□□□ -1.48
HDAC4P56524 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.8□□□□□ -1.48
HDAC4P56524 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.8□□□□□ -1.48
HDAC4P56524 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
HDAC4P56524 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HDAC4P56524 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HDAC4P56524 MT-RNR2-201ENST00000387347 1559 ntBASIC5.8□□□□□ -1.48
HDAC4P56524 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HDAC4P56524 LINC01963-201ENST00000562038 3148 ntBASIC5.79□□□□□ -1.48
HDAC4P56524 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
HDAC4P56524 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HDAC4P56524 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HDAC4P56524 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.79□□□□□ -1.48
HDAC4P56524 MIR323A-201ENST00000362199 86 ntBASIC5.79□□□□□ -1.48
HDAC4P56524 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HDAC4P56524 AL031985.1-201ENST00000392713 418 ntBASIC5.79□□□□□ -1.48
HDAC4P56524 RNA5SP296-201ENST00000410523 111 ntBASIC5.79□□□□□ -1.48
HDAC4P56524 AL133173.1-201ENST00000423458 397 ntBASIC5.79□□□□□ -1.48
HDAC4P56524 HSPE1P16-201ENST00000426640 348 ntBASIC5.79□□□□□ -1.48
HDAC4P56524 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.79□□□□□ -1.48
HDAC4P56524 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.79□□□□□ -1.48
HDAC4P56524 AC138761.5-201ENST00000433967 325 ntBASIC5.79□□□□□ -1.48
HDAC4P56524 OR6D1P-201ENST00000436165 939 ntBASIC5.79□□□□□ -1.48
HDAC4P56524 AC002504.1-201ENST00000438281 691 ntBASIC5.79□□□□□ -1.48
HDAC4P56524 AL450996.1-201ENST00000445574 1202 ntBASIC5.79□□□□□ -1.48
HDAC4P56524 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.79□□□□□ -1.48
HDAC4P56524 AL353718.1-201ENST00000451028 517 ntBASIC5.79□□□□□ -1.48
HDAC4P56524 AC008628.1-201ENST00000508663 265 ntBASIC5.79□□□□□ -1.48
HDAC4P56524 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.79□□□□□ -1.48
HDAC4P56524 RNU6-491P-201ENST00000516099 110 ntBASIC5.79□□□□□ -1.48
HDAC4P56524 AC138832.1-201ENST00000522871 556 ntBASIC5.79□□□□□ -1.48
HDAC4P56524 OR4A46P-201ENST00000527255 933 ntBASIC5.79□□□□□ -1.48
HDAC4P56524 AC090022.1-201ENST00000546569 311 ntBASIC5.79□□□□□ -1.48
HDAC4P56524 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.79□□□□□ -1.48
HDAC4P56524 AL136520.1-202ENST00000555494 763 ntBASIC5.79□□□□□ -1.48
HDAC4P56524 MRPS21P7-201ENST00000566937 238 ntBASIC5.79□□□□□ -1.48
HDAC4P56524 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.79□□□□□ -1.48
HDAC4P56524 AC020978.7-201ENST00000575953 1187 ntBASIC5.79□□□□□ -1.48
HDAC4P56524 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.79□□□□□ -1.48
HDAC4P56524 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.79□□□□□ -1.48
HDAC4P56524 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.79□□□□□ -1.48
HDAC4P56524 OR4H6P-202ENST00000603819 340 ntBASIC5.79□□□□□ -1.48
HDAC4P56524 AC024933.1-201ENST00000608472 348 ntBASIC5.79□□□□□ -1.48
HDAC4P56524 AL356608.1-201ENST00000610034 820 ntBASIC5.79□□□□□ -1.48
HDAC4P56524 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.79□□□□□ -1.48
HDAC4P56524 AL139407.1-201ENST00000613826 1175 ntBASIC5.79□□□□□ -1.48
HDAC4P56524 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.79□□□□□ -1.48
HDAC4P56524 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.79□□□□□ -1.48
HDAC4P56524 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
HDAC4P56524 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HDAC4P56524 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HDAC4P56524 MAPK10-328ENST00000641553 4009 ntBASIC5.79□□□□□ -1.48
HDAC4P56524 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
HDAC4P56524 AC104260.2-201ENST00000623551 3497 ntBASIC5.79□□□□□ -1.48
HDAC4P56524 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.79□□□□□ -1.48
HDAC4P56524 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
HDAC4P56524 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HDAC4P56524 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HDAC4P56524 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HDAC4P56524 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.78□□□□□ -1.48
HDAC4P56524 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.78□□□□□ -1.48
HDAC4P56524 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
HDAC4P56524 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HDAC4P56524 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HDAC4P56524 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HDAC4P56524 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HDAC4P56524 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HDAC4P56524 RNU6-1263P-201ENST00000384601 106 ntBASIC5.78□□□□□ -1.48
HDAC4P56524 AL356317.1-201ENST00000396110 1436 ntBASIC5.78□□□□□ -1.48
HDAC4P56524 CCNB2P1-201ENST00000399411 1150 ntBASIC5.78□□□□□ -1.48
HDAC4P56524 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
HDAC4P56524 GAPDHP42-201ENST00000406848 981 ntBASIC5.78□□□□□ -1.48
HDAC4P56524 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.78□□□□□ -1.48
HDAC4P56524 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.78□□□□□ -1.48
HDAC4P56524 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.78□□□□□ -1.48
HDAC4P56524 RIMKLBP2-201ENST00000424737 654 ntBASIC5.78□□□□□ -1.48
HDAC4P56524 RNF19BPX-201ENST00000426224 625 ntBASIC5.78□□□□□ -1.48
HDAC4P56524 MTCO1P45-201ENST00000431457 267 ntBASIC5.78□□□□□ -1.48
HDAC4P56524 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HDAC4P56524 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HDAC4P56524 AP000281.1-201ENST00000444036 316 ntBASIC5.78□□□□□ -1.48
HDAC4P56524 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.78□□□□□ -1.48
HDAC4P56524 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms