Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.03□□□□□ -1.44
GFRA1P56159 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
GFRA1P56159 RNF6P1-201ENST00000444889 1784 ntBASIC6.03□□□□□ -1.44
GFRA1P56159 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
GFRA1P56159 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
GFRA1P56159 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
GFRA1P56159 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
GFRA1P56159 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
GFRA1P56159 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
GFRA1P56159 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
GFRA1P56159 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
GFRA1P56159 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
GFRA1P56159 AC005832.2-201ENST00000538921 1430 ntBASIC6.03□□□□□ -1.44
GFRA1P56159 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
GFRA1P56159 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
GFRA1P56159 RNU6-1066P-201ENST00000363573 105 ntBASIC6.03□□□□□ -1.44
GFRA1P56159 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
GFRA1P56159 ATP5F1P4-201ENST00000397288 746 ntBASIC6.03□□□□□ -1.44
GFRA1P56159 TANK-206ENST00000406287 875 ntTSL 5 BASIC6.03□□□□□ -1.44
GFRA1P56159 RPL23AP47-201ENST00000408017 460 ntBASIC6.03□□□□□ -1.44
GFRA1P56159 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.03□□□□□ -1.44
GFRA1P56159 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC6.03□□□□□ -1.44
GFRA1P56159 MTND4LP11-201ENST00000422184 280 ntBASIC6.03□□□□□ -1.44
GFRA1P56159 GAPDHP19-201ENST00000431768 1005 ntBASIC6.03□□□□□ -1.44
GFRA1P56159 USP9YP35-201ENST00000435696 412 ntBASIC6.03□□□□□ -1.44
GFRA1P56159 AC128677.1-201ENST00000436016 442 ntBASIC6.03□□□□□ -1.44
GFRA1P56159 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.03□□□□□ -1.44
GFRA1P56159 AC092809.1-201ENST00000441469 474 ntBASIC6.03□□□□□ -1.44
GFRA1P56159 GAPDHP37-201ENST00000442317 968 ntBASIC6.03□□□□□ -1.44
GFRA1P56159 ANKRD30BP3-201ENST00000444850 1070 ntBASIC6.03□□□□□ -1.44
GFRA1P56159 MTND1P1-201ENST00000445453 368 ntBASIC6.03□□□□□ -1.44
GFRA1P56159 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC6.03□□□□□ -1.44
GFRA1P56159 KF459542.1-201ENST00000450908 553 ntBASIC6.03□□□□□ -1.44
GFRA1P56159 OR6C5P-201ENST00000452388 923 ntBASIC6.03□□□□□ -1.44
GFRA1P56159 DNAJB5P1-201ENST00000454004 806 ntBASIC6.03□□□□□ -1.44
GFRA1P56159 RN7SL705P-201ENST00000481678 294 ntBASIC6.03□□□□□ -1.44
GFRA1P56159 AC011825.1-201ENST00000484967 388 ntBASIC6.03□□□□□ -1.44
GFRA1P56159 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC6.03□□□□□ -1.44
GFRA1P56159 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC6.03□□□□□ -1.44
GFRA1P56159 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC6.03□□□□□ -1.44
GFRA1P56159 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC6.03□□□□□ -1.44
GFRA1P56159 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC6.03□□□□□ -1.44
GFRA1P56159 RNA5SP135-201ENST00000517019 125 ntBASIC6.03□□□□□ -1.44
GFRA1P56159 AC092709.1-201ENST00000521355 1045 ntBASIC6.03□□□□□ -1.44
GFRA1P56159 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.03□□□□□ -1.44
GFRA1P56159 OR5G4P-201ENST00000525251 760 ntBASIC6.03□□□□□ -1.44
GFRA1P56159 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC6.03□□□□□ -1.44
GFRA1P56159 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
GFRA1P56159 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
GFRA1P56159 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC6.03□□□□□ -1.44
GFRA1P56159 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
GFRA1P56159 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC6.03□□□□□ -1.44
GFRA1P56159 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC6.03□□□□□ -1.44
GFRA1P56159 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC6.03□□□□□ -1.44
GFRA1P56159 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.03□□□□□ -1.44
GFRA1P56159 AL390877.1-201ENST00000605704 214 ntBASIC6.03□□□□□ -1.44
GFRA1P56159 AP004247.3-201ENST00000608682 624 ntBASIC6.03□□□□□ -1.44
GFRA1P56159 AC106028.5-201ENST00000610332 395 ntBASIC6.03□□□□□ -1.44
GFRA1P56159 AC015819.1-201ENST00000613588 663 ntBASIC6.03□□□□□ -1.44
GFRA1P56159 AL121873.1-201ENST00000616013 524 ntBASIC6.03□□□□□ -1.44
GFRA1P56159 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC6.03□□□□□ -1.44
GFRA1P56159 AC018926.3-201ENST00000618841 406 ntBASIC6.03□□□□□ -1.44
GFRA1P56159 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
GFRA1P56159 AP000577.1-201ENST00000624366 878 ntBASIC6.03□□□□□ -1.44
GFRA1P56159 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC6.03□□□□□ -1.44
GFRA1P56159 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
GFRA1P56159 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
GFRA1P56159 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
GFRA1P56159 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.03□□□□□ -1.44
GFRA1P56159 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
GFRA1P56159 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.03□□□□□ -1.44
GFRA1P56159 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
GFRA1P56159 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
GFRA1P56159 MAPK10-357ENST00000641831 2858 ntBASIC6.03□□□□□ -1.44
GFRA1P56159 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
GFRA1P56159 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.03□□□□□ -1.44
GFRA1P56159 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
GFRA1P56159 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
GFRA1P56159 ASNSP6-201ENST00000592770 1618 ntBASIC6.03□□□□□ -1.44
GFRA1P56159 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
GFRA1P56159 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC6.03□□□□□ -1.44
GFRA1P56159 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
GFRA1P56159 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC6.02□□□□□ -1.44
GFRA1P56159 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.44
GFRA1P56159 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
GFRA1P56159 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
GFRA1P56159 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
GFRA1P56159 AC092821.3-202ENST00000641304 2767 ntBASIC6.02□□□□□ -1.45
GFRA1P56159 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC6.02□□□□□ -1.45
GFRA1P56159 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC6.02□□□□□ -1.45
GFRA1P56159 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
GFRA1P56159 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
GFRA1P56159 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
GFRA1P56159 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
GFRA1P56159 AC010401.2-201ENST00000575137 4934 ntBASIC6.02□□□□□ -1.45
GFRA1P56159 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
GFRA1P56159 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC6.02□□□□□ -1.45
GFRA1P56159 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.02□□□□□ -1.45
GFRA1P56159 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
GFRA1P56159 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms