Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.54□□□□□ -1.52
SUMO3P55854 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SUMO3P55854 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
SUMO3P55854 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
SUMO3P55854 RNU1-134P-201ENST00000362935 165 ntBASIC5.54□□□□□ -1.52
SUMO3P55854 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SUMO3P55854 MTND4P13-201ENST00000402078 1023 ntBASIC5.54□□□□□ -1.52
SUMO3P55854 AL356320.2-201ENST00000417263 507 ntBASIC5.54□□□□□ -1.52
SUMO3P55854 Z75741.2-201ENST00000417272 1167 ntBASIC5.54□□□□□ -1.52
SUMO3P55854 AC027644.1-201ENST00000419595 298 ntBASIC5.54□□□□□ -1.52
SUMO3P55854 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.54□□□□□ -1.52
SUMO3P55854 AC010099.3-201ENST00000423896 409 ntBASIC5.54□□□□□ -1.52
SUMO3P55854 AC021876.1-201ENST00000425959 359 ntBASIC5.54□□□□□ -1.52
SUMO3P55854 HIGD1AP12-201ENST00000427832 281 ntBASIC5.54□□□□□ -1.52
SUMO3P55854 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SUMO3P55854 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC5.54□□□□□ -1.52
SUMO3P55854 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC5.54□□□□□ -1.52
SUMO3P55854 FTLP8-201ENST00000446770 267 ntBASIC5.54□□□□□ -1.52
SUMO3P55854 MTCYBP11-201ENST00000447254 1109 ntBASIC5.54□□□□□ -1.52
SUMO3P55854 AC016027.4-201ENST00000450866 277 ntBASIC5.54□□□□□ -1.52
SUMO3P55854 TRBV8-2-201ENST00000475637 270 ntBASIC5.54□□□□□ -1.52
SUMO3P55854 AC092865.4-201ENST00000477936 615 ntBASIC5.54□□□□□ -1.52
SUMO3P55854 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SUMO3P55854 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.54□□□□□ -1.52
SUMO3P55854 AC011037.1-201ENST00000483964 558 ntBASIC5.54□□□□□ -1.52
SUMO3P55854 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.54□□□□□ -1.52
SUMO3P55854 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC5.54□□□□□ -1.52
SUMO3P55854 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SUMO3P55854 AC119751.5-201ENST00000514077 770 ntBASIC5.54□□□□□ -1.52
SUMO3P55854 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.54□□□□□ -1.52
SUMO3P55854 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC5.54□□□□□ -1.52
SUMO3P55854 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.54□□□□□ -1.52
SUMO3P55854 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.54□□□□□ -1.52
SUMO3P55854 AP001636.2-201ENST00000525517 696 ntBASIC5.54□□□□□ -1.52
SUMO3P55854 MTCO2P15-201ENST00000532655 656 ntBASIC5.54□□□□□ -1.52
SUMO3P55854 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.54□□□□□ -1.52
SUMO3P55854 MRPS36P5-201ENST00000551909 298 ntBASIC5.54□□□□□ -1.52
SUMO3P55854 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.54□□□□□ -1.52
SUMO3P55854 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC5.54□□□□□ -1.52
SUMO3P55854 AC092332.1-201ENST00000563684 829 ntBASIC5.54□□□□□ -1.52
SUMO3P55854 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.54□□□□□ -1.52
SUMO3P55854 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.54□□□□□ -1.52
SUMO3P55854 AC061975.8-201ENST00000587058 721 ntBASIC5.54□□□□□ -1.52
SUMO3P55854 AC119403.2-201ENST00000590960 598 ntBASIC5.54□□□□□ -1.52
SUMO3P55854 AC016877.3-201ENST00000606778 504 ntBASIC5.54□□□□□ -1.52
SUMO3P55854 AC092681.3-201ENST00000609463 678 ntBASIC5.54□□□□□ -1.52
SUMO3P55854 AC096861.1-201ENST00000616652 240 ntBASIC5.54□□□□□ -1.52
SUMO3P55854 RFPL4AP6-201ENST00000616792 846 ntBASIC5.54□□□□□ -1.52
SUMO3P55854 AC013470.4-201ENST00000619978 986 ntBASIC5.54□□□□□ -1.52
SUMO3P55854 AC120349.3-201ENST00000624377 529 ntBASIC5.54□□□□□ -1.52
SUMO3P55854 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC5.54□□□□□ -1.52
SUMO3P55854 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.54□□□□□ -1.52
SUMO3P55854 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SUMO3P55854 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.54□□□□□ -1.52
SUMO3P55854 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.54□□□□□ -1.52
SUMO3P55854 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SUMO3P55854 AC079753.1-201ENST00000623243 3868 ntBASIC5.54□□□□□ -1.52
SUMO3P55854 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
SUMO3P55854 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SUMO3P55854 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC5.53□□□□□ -1.52
SUMO3P55854 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
SUMO3P55854 MTCO1P7-201ENST00000419523 1542 ntBASIC5.53□□□□□ -1.52
SUMO3P55854 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.53□□□□□ -1.52
SUMO3P55854 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SUMO3P55854 AC007842.1-201ENST00000597336 2039 ntBASIC5.53□□□□□ -1.52
SUMO3P55854 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SUMO3P55854 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SUMO3P55854 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
SUMO3P55854 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SUMO3P55854 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.53□□□□□ -1.52
SUMO3P55854 DNM1P47-203ENST00000571780 12667 ntBASIC5.53□□□□□ -1.52
SUMO3P55854 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.53□□□□□ -1.52
SUMO3P55854 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
SUMO3P55854 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SUMO3P55854 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SUMO3P55854 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SUMO3P55854 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SUMO3P55854 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SUMO3P55854 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
SUMO3P55854 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
SUMO3P55854 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
SUMO3P55854 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
SUMO3P55854 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SUMO3P55854 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SUMO3P55854 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
SUMO3P55854 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SUMO3P55854 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SUMO3P55854 RN7SKP171-201ENST00000364417 303 ntBASIC5.53□□□□□ -1.52
SUMO3P55854 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.53□□□□□ -1.52
SUMO3P55854 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SUMO3P55854 RNU6-1242P-201ENST00000391052 103 ntBASIC5.53□□□□□ -1.52
SUMO3P55854 AL590290.1-201ENST00000405336 380 ntBASIC5.53□□□□□ -1.52
SUMO3P55854 AL096829.1-201ENST00000413677 457 ntBASIC5.53□□□□□ -1.52
SUMO3P55854 SLC20A1P1-201ENST00000413906 956 ntBASIC5.53□□□□□ -1.52
SUMO3P55854 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.53□□□□□ -1.52
SUMO3P55854 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.53□□□□□ -1.52
SUMO3P55854 RPF2P1-201ENST00000424137 906 ntBASIC5.53□□□□□ -1.52
SUMO3P55854 OR5AW1P-201ENST00000426334 1006 ntBASIC5.53□□□□□ -1.52
SUMO3P55854 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.53□□□□□ -1.52
SUMO3P55854 HIGD1AP4-201ENST00000430194 280 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms