Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NKX2-1P43699 GCNT6-201ENST00000379591 934 ntBASIC4.61□□□□□ -1.67
NKX2-1P43699 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC4.61□□□□□ -1.67
NKX2-1P43699 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
NKX2-1P43699 RNU6-532P-201ENST00000384318 107 ntBASIC4.61□□□□□ -1.67
NKX2-1P43699 MIR191-201ENST00000384873 92 ntBASIC4.61□□□□□ -1.67
NKX2-1P43699 MIR130A-201ENST00000385274 89 ntBASIC4.61□□□□□ -1.67
NKX2-1P43699 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NKX2-1P43699 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC4.61□□□□□ -1.67
NKX2-1P43699 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC4.61□□□□□ -1.67
NKX2-1P43699 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.61□□□□□ -1.67
NKX2-1P43699 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.61□□□□□ -1.67
NKX2-1P43699 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.61□□□□□ -1.67
NKX2-1P43699 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC4.61□□□□□ -1.67
NKX2-1P43699 TCEA1P3-201ENST00000443005 880 ntBASIC4.61□□□□□ -1.67
NKX2-1P43699 BMS1P10-201ENST00000443754 1120 ntBASIC4.61□□□□□ -1.67
NKX2-1P43699 RPS27P5-201ENST00000444247 244 ntBASIC4.61□□□□□ -1.67
NKX2-1P43699 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.61□□□□□ -1.67
NKX2-1P43699 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
NKX2-1P43699 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC4.61□□□□□ -1.67
NKX2-1P43699 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NKX2-1P43699 KF459542.1-201ENST00000450908 553 ntBASIC4.61□□□□□ -1.67
NKX2-1P43699 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC4.61□□□□□ -1.67
NKX2-1P43699 FCF1P6-201ENST00000456841 595 ntBASIC4.61□□□□□ -1.67
NKX2-1P43699 H3F3AP5-201ENST00000475267 429 ntBASIC4.61□□□□□ -1.67
NKX2-1P43699 RPS27P20-201ENST00000492051 246 ntBASIC4.61□□□□□ -1.67
NKX2-1P43699 AL049874.2-201ENST00000492636 288 ntBASIC4.61□□□□□ -1.67
NKX2-1P43699 EIF3LP3-201ENST00000495197 822 ntBASIC4.61□□□□□ -1.67
NKX2-1P43699 RN7SL612P-201ENST00000497704 295 ntBASIC4.61□□□□□ -1.67
NKX2-1P43699 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC4.61□□□□□ -1.67
NKX2-1P43699 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
NKX2-1P43699 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC4.61□□□□□ -1.67
NKX2-1P43699 HAUS1P3-201ENST00000523909 662 ntBASIC4.61□□□□□ -1.67
NKX2-1P43699 FAU-203ENST00000525297 355 ntTSL 5 BASIC4.61□□□□□ -1.67
NKX2-1P43699 PMS2P3-207ENST00000529061 717 ntBASIC4.61□□□□□ -1.67
NKX2-1P43699 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
NKX2-1P43699 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC4.61□□□□□ -1.67
NKX2-1P43699 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.61□□□□□ -1.67
NKX2-1P43699 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.61□□□□□ -1.67
NKX2-1P43699 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.61□□□□□ -1.67
NKX2-1P43699 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.61□□□□□ -1.67
NKX2-1P43699 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC4.61□□□□□ -1.67
NKX2-1P43699 AGGF1P7-201ENST00000562369 913 ntBASIC4.61□□□□□ -1.67
NKX2-1P43699 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC4.61□□□□□ -1.67
NKX2-1P43699 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4.61□□□□□ -1.67
NKX2-1P43699 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.61□□□□□ -1.67
NKX2-1P43699 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC4.61□□□□□ -1.67
NKX2-1P43699 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.61□□□□□ -1.67
NKX2-1P43699 RN7SL230P-201ENST00000580835 303 ntBASIC4.61□□□□□ -1.67
NKX2-1P43699 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC4.61□□□□□ -1.67
NKX2-1P43699 AC010487.1-201ENST00000594408 1172 ntBASIC4.61□□□□□ -1.67
NKX2-1P43699 AC005479.3-201ENST00000602790 431 ntBASIC4.61□□□□□ -1.67
NKX2-1P43699 SMIM12P1-201ENST00000603004 274 ntBASIC4.61□□□□□ -1.67
NKX2-1P43699 AC005034.4-201ENST00000603612 899 ntBASIC4.61□□□□□ -1.67
NKX2-1P43699 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC4.61□□□□□ -1.67
NKX2-1P43699 AC012676.3-201ENST00000614983 479 ntBASIC4.61□□□□□ -1.67
NKX2-1P43699 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC4.61□□□□□ -1.67
NKX2-1P43699 SAMMSON-209ENST00000641222 1100 ntBASIC4.61□□□□□ -1.67
NKX2-1P43699 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
NKX2-1P43699 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NKX2-1P43699 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NKX2-1P43699 SMG1P4-204ENST00000523028 4131 ntBASIC4.61□□□□□ -1.67
NKX2-1P43699 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NKX2-1P43699 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.61□□□□□ -1.67
NKX2-1P43699 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NKX2-1P43699 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
NKX2-1P43699 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC4.61□□□□□ -1.67
NKX2-1P43699 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.61□□□□□ -1.67
NKX2-1P43699 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NKX2-1P43699 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC4.61□□□□□ -1.67
NKX2-1P43699 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
NKX2-1P43699 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
NKX2-1P43699 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC4.6□□□□□ -1.67
NKX2-1P43699 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.6□□□□□ -1.67
NKX2-1P43699 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
NKX2-1P43699 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.6□□□□□ -1.67
NKX2-1P43699 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
NKX2-1P43699 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NKX2-1P43699 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
NKX2-1P43699 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.6□□□□□ -1.67
NKX2-1P43699 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NKX2-1P43699 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NKX2-1P43699 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
NKX2-1P43699 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NKX2-1P43699 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
NKX2-1P43699 OR9K1P-201ENST00000326513 941 ntBASIC4.6□□□□□ -1.67
NKX2-1P43699 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NKX2-1P43699 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NKX2-1P43699 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NKX2-1P43699 MIR620-201ENST00000385232 95 ntBASIC4.6□□□□□ -1.67
NKX2-1P43699 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
NKX2-1P43699 RNA5SP241-201ENST00000391326 114 ntBASIC4.6□□□□□ -1.67
NKX2-1P43699 ATP5F1P6-201ENST00000402768 767 ntBASIC4.6□□□□□ -1.67
NKX2-1P43699 RPS27AP11-201ENST00000402798 447 ntBASIC4.6□□□□□ -1.67
NKX2-1P43699 XKRYP4-201ENST00000414395 483 ntBASIC4.6□□□□□ -1.67
NKX2-1P43699 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC4.6□□□□□ -1.67
NKX2-1P43699 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4.6□□□□□ -1.67
NKX2-1P43699 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.6□□□□□ -1.67
NKX2-1P43699 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC4.6□□□□□ -1.67
NKX2-1P43699 AC099782.1-201ENST00000425889 474 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms