Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 RPS26P39-201ENST00000469206 341 ntBASIC5.23□□□□□ -1.57
HMGCLP35914 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.23□□□□□ -1.57
HMGCLP35914 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.23□□□□□ -1.57
HMGCLP35914 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HMGCLP35914 AC011411.1-201ENST00000509592 876 ntBASIC5.23□□□□□ -1.57
HMGCLP35914 GTF2F2P1-201ENST00000511083 675 ntBASIC5.23□□□□□ -1.57
HMGCLP35914 EIF3KP3-201ENST00000514461 639 ntBASIC5.23□□□□□ -1.57
HMGCLP35914 RNU6-513P-201ENST00000516104 104 ntBASIC5.23□□□□□ -1.57
HMGCLP35914 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.23□□□□□ -1.57
HMGCLP35914 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.23□□□□□ -1.57
HMGCLP35914 OR4A46P-201ENST00000527255 933 ntBASIC5.23□□□□□ -1.57
HMGCLP35914 AC024940.3-201ENST00000538551 316 ntBASIC5.23□□□□□ -1.57
HMGCLP35914 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.23□□□□□ -1.57
HMGCLP35914 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.23□□□□□ -1.57
HMGCLP35914 MTCYBP13-201ENST00000578634 1093 ntBASIC5.23□□□□□ -1.57
HMGCLP35914 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HMGCLP35914 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.23□□□□□ -1.57
HMGCLP35914 SUMO2P15-201ENST00000604285 278 ntBASIC5.23□□□□□ -1.57
HMGCLP35914 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.23□□□□□ -1.57
HMGCLP35914 AC008833.1-201ENST00000611633 691 ntBASIC5.23□□□□□ -1.57
HMGCLP35914 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
HMGCLP35914 AC135068.12-201ENST00000637370 931 ntBASIC5.23□□□□□ -1.57
HMGCLP35914 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HMGCLP35914 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.23□□□□□ -1.57
HMGCLP35914 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
HMGCLP35914 PABPC1P6-201ENST00000445594 1829 ntBASIC5.23□□□□□ -1.57
HMGCLP35914 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HMGCLP35914 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.23□□□□□ -1.57
HMGCLP35914 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
HMGCLP35914 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HMGCLP35914 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HMGCLP35914 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HMGCLP35914 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HMGCLP35914 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HMGCLP35914 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.22□□□□□ -1.57
HMGCLP35914 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HMGCLP35914 AC092376.2-201ENST00000622621 4116 ntBASIC5.22□□□□□ -1.57
HMGCLP35914 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HMGCLP35914 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HMGCLP35914 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HMGCLP35914 MIR1182-201ENST00000408363 97 ntBASIC5.22□□□□□ -1.57
HMGCLP35914 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.22□□□□□ -1.57
HMGCLP35914 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.22□□□□□ -1.57
HMGCLP35914 RPS29P10-201ENST00000439197 166 ntBASIC5.22□□□□□ -1.57
HMGCLP35914 AC245047.2-201ENST00000441060 530 ntBASIC5.22□□□□□ -1.57
HMGCLP35914 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.22□□□□□ -1.57
HMGCLP35914 BX842559.2-201ENST00000451418 605 ntBASIC5.22□□□□□ -1.57
HMGCLP35914 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.22□□□□□ -1.57
HMGCLP35914 RN7SL172P-201ENST00000460535 303 ntBASIC5.22□□□□□ -1.57
HMGCLP35914 OR11I1P-201ENST00000486033 954 ntBASIC5.22□□□□□ -1.57
HMGCLP35914 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.22□□□□□ -1.57
HMGCLP35914 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.22□□□□□ -1.57
HMGCLP35914 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.22□□□□□ -1.57
HMGCLP35914 AP000859.1-201ENST00000525536 307 ntBASIC5.22□□□□□ -1.57
HMGCLP35914 AC027369.5-201ENST00000533838 755 ntBASIC5.22□□□□□ -1.57
HMGCLP35914 AC134349.2-201ENST00000535136 910 ntBASIC5.22□□□□□ -1.57
HMGCLP35914 AC004825.1-201ENST00000555068 586 ntBASIC5.22□□□□□ -1.57
HMGCLP35914 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.22□□□□□ -1.57
HMGCLP35914 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
HMGCLP35914 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.22□□□□□ -1.57
HMGCLP35914 AC118658.2-201ENST00000618697 459 ntBASIC5.22□□□□□ -1.57
HMGCLP35914 AC026367.3-201ENST00000619032 590 ntBASIC5.22□□□□□ -1.57
HMGCLP35914 AL355480.1-201ENST00000629041 99 ntBASIC5.22□□□□□ -1.57
HMGCLP35914 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.22□□□□□ -1.57
HMGCLP35914 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HMGCLP35914 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.22□□□□□ -1.57
HMGCLP35914 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.22□□□□□ -1.57
HMGCLP35914 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
HMGCLP35914 MTCO1P15-201ENST00000529569 1526 ntBASIC5.22□□□□□ -1.57
HMGCLP35914 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HMGCLP35914 AC235565.1-201ENST00000456962 1325 ntBASIC5.22□□□□□ -1.57
HMGCLP35914 CIR1P2-201ENST00000514821 1342 ntBASIC5.22□□□□□ -1.57
HMGCLP35914 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
HMGCLP35914 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
HMGCLP35914 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HMGCLP35914 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HMGCLP35914 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.21□□□□□ -1.58
HMGCLP35914 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HMGCLP35914 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
HMGCLP35914 SNORA17.1-201ENST00000362945 126 ntBASIC5.21□□□□□ -1.58
HMGCLP35914 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.21□□□□□ -1.58
HMGCLP35914 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HMGCLP35914 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.21□□□□□ -1.58
HMGCLP35914 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HMGCLP35914 MIR223-201ENST00000385204 110 ntBASIC5.21□□□□□ -1.58
HMGCLP35914 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.21□□□□□ -1.58
HMGCLP35914 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.21□□□□□ -1.58
HMGCLP35914 AC244033.1-201ENST00000426826 870 ntBASIC5.21□□□□□ -1.58
HMGCLP35914 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.21□□□□□ -1.58
HMGCLP35914 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.21□□□□□ -1.58
HMGCLP35914 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.21□□□□□ -1.58
HMGCLP35914 MTND4LP12-201ENST00000448237 295 ntBASIC5.21□□□□□ -1.58
HMGCLP35914 RN7SL30P-201ENST00000488416 306 ntBASIC5.21□□□□□ -1.58
HMGCLP35914 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
HMGCLP35914 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.21□□□□□ -1.58
HMGCLP35914 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HMGCLP35914 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.21□□□□□ -1.58
HMGCLP35914 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC5.21□□□□□ -1.58
HMGCLP35914 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.21□□□□□ -1.58
HMGCLP35914 AC090022.1-201ENST00000546569 311 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms