Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.11□□□□□ -1.43
SCN4AP35499 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
SCN4AP35499 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.11□□□□□ -1.43
SCN4AP35499 AC063976.2-201ENST00000425667 3556 ntBASIC6.11□□□□□ -1.43
SCN4AP35499 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
SCN4AP35499 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.11□□□□□ -1.43
SCN4AP35499 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SCN4AP35499 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SCN4AP35499 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SCN4AP35499 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SCN4AP35499 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
SCN4AP35499 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SCN4AP35499 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SCN4AP35499 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC6.11□□□□□ -1.43
SCN4AP35499 AC114755.2-201ENST00000413520 361 ntBASIC6.11□□□□□ -1.43
SCN4AP35499 CENPIP1-201ENST00000425713 902 ntBASIC6.11□□□□□ -1.43
SCN4AP35499 NRBF2P3-201ENST00000432731 865 ntBASIC6.11□□□□□ -1.43
SCN4AP35499 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC6.11□□□□□ -1.43
SCN4AP35499 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC6.11□□□□□ -1.43
SCN4AP35499 AC021106.3-201ENST00000623925 531 ntBASIC6.11□□□□□ -1.43
SCN4AP35499 IPO5-229ENST00000631030 192 ntTSL 5 BASIC6.11□□□□□ -1.43
SCN4AP35499 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SCN4AP35499 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
SCN4AP35499 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.1□□□□□ -1.43
SCN4AP35499 LCOR-201ENST00000286067 4542 ntBASIC6.1□□□□□ -1.43
SCN4AP35499 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SCN4AP35499 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.1□□□□□ -1.43
SCN4AP35499 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SCN4AP35499 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SCN4AP35499 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SCN4AP35499 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.1□□□□□ -1.43
SCN4AP35499 AL117339.4-201ENST00000608335 7063 ntBASIC6.1□□□□□ -1.43
SCN4AP35499 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
SCN4AP35499 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC6.1□□□□□ -1.43
SCN4AP35499 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.1□□□□□ -1.43
SCN4AP35499 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
SCN4AP35499 AL158827.1-201ENST00000416300 391 ntBASIC6.1□□□□□ -1.43
SCN4AP35499 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC6.1□□□□□ -1.43
SCN4AP35499 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC6.1□□□□□ -1.43
SCN4AP35499 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.1□□□□□ -1.43
SCN4AP35499 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC6.1□□□□□ -1.43
SCN4AP35499 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC6.1□□□□□ -1.43
SCN4AP35499 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SCN4AP35499 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC6.1□□□□□ -1.43
SCN4AP35499 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC6.1□□□□□ -1.43
SCN4AP35499 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
SCN4AP35499 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC6.1□□□□□ -1.43
SCN4AP35499 VN1R85P-201ENST00000601587 426 ntBASIC6.1□□□□□ -1.43
SCN4AP35499 AC000095.2-202ENST00000637415 154 ntBASIC6.1□□□□□ -1.43
SCN4AP35499 MTCO1P15-201ENST00000529569 1526 ntBASIC6.1□□□□□ -1.43
SCN4AP35499 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
SCN4AP35499 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SCN4AP35499 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SCN4AP35499 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SCN4AP35499 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
SCN4AP35499 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SCN4AP35499 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SCN4AP35499 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.09□□□□□ -1.43
SCN4AP35499 RNU1-85P-201ENST00000364127 164 ntBASIC6.09□□□□□ -1.43
SCN4AP35499 U3.22-201ENST00000391120 215 ntBASIC6.09□□□□□ -1.43
SCN4AP35499 RN7SKP114-201ENST00000410327 279 ntBASIC6.09□□□□□ -1.43
SCN4AP35499 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.09□□□□□ -1.43
SCN4AP35499 RPL23AP1-201ENST00000428990 471 ntBASIC6.09□□□□□ -1.43
SCN4AP35499 RPL5P2-201ENST00000429598 854 ntBASIC6.09□□□□□ -1.43
SCN4AP35499 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC6.09□□□□□ -1.43
SCN4AP35499 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC6.09□□□□□ -1.43
SCN4AP35499 MED28P3-201ENST00000444288 531 ntBASIC6.09□□□□□ -1.43
SCN4AP35499 AURKAPS2-201ENST00000454983 333 ntBASIC6.09□□□□□ -1.43
SCN4AP35499 AC109327.1-201ENST00000471666 403 ntBASIC6.09□□□□□ -1.43
SCN4AP35499 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.09□□□□□ -1.43
SCN4AP35499 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC6.09□□□□□ -1.43
SCN4AP35499 OR4A17P-201ENST00000526032 904 ntBASIC6.09□□□□□ -1.43
SCN4AP35499 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SCN4AP35499 GMFG-202ENST00000594700 397 ntTSL 2 BASIC6.09□□□□□ -1.43
SCN4AP35499 AC067959.1-201ENST00000604334 379 ntBASIC6.09□□□□□ -1.43
SCN4AP35499 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SCN4AP35499 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
SCN4AP35499 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.09□□□□□ -1.43
SCN4AP35499 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
SCN4AP35499 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
SCN4AP35499 MFSD8-220ENST00000641243 1422 ntBASIC6.09□□□□□ -1.43
SCN4AP35499 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.09□□□□□ -1.43
SCN4AP35499 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SCN4AP35499 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.09□□□□□ -1.44
SCN4AP35499 AL359715.3-201ENST00000569267 2123 ntBASIC6.09□□□□□ -1.44
SCN4AP35499 AC104118.1-201ENST00000607625 1589 ntBASIC6.09□□□□□ -1.44
SCN4AP35499 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.09□□□□□ -1.44
SCN4AP35499 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.09□□□□□ -1.44
SCN4AP35499 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC6.09□□□□□ -1.44
SCN4AP35499 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.09□□□□□ -1.44
SCN4AP35499 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC6.09□□□□□ -1.44
SCN4AP35499 AL592293.2-201ENST00000422292 996 ntBASIC6.09□□□□□ -1.44
SCN4AP35499 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC6.09□□□□□ -1.44
SCN4AP35499 NPM1P33-201ENST00000438918 872 ntBASIC6.09□□□□□ -1.44
SCN4AP35499 LINC02210-201ENST00000444561 288 ntBASIC6.09□□□□□ -1.44
SCN4AP35499 AL359073.1-201ENST00000448036 403 ntBASIC6.09□□□□□ -1.44
SCN4AP35499 OR1H1P-201ENST00000448731 937 ntBASIC6.09□□□□□ -1.44
SCN4AP35499 AK3P4-201ENST00000504283 583 ntBASIC6.09□□□□□ -1.44
SCN4AP35499 AC010350.1-201ENST00000504908 231 ntBASIC6.09□□□□□ -1.44
SCN4AP35499 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC6.09□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 195.3 ms