Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AC022832.1-201ENST00000530718 645 ntBASIC5.13□□□□□ -1.59
RORAP35398 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.13□□□□□ -1.59
RORAP35398 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.13□□□□□ -1.59
RORAP35398 RPL10P14-201ENST00000565265 298 ntBASIC5.13□□□□□ -1.59
RORAP35398 AP005262.1-201ENST00000582646 997 ntBASIC5.13□□□□□ -1.59
RORAP35398 AC069307.1-201ENST00000602820 447 ntBASIC5.13□□□□□ -1.59
RORAP35398 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.13□□□□□ -1.59
RORAP35398 AL356608.1-201ENST00000610034 820 ntBASIC5.13□□□□□ -1.59
RORAP35398 RPSAP73-201ENST00000614820 330 ntBASIC5.13□□□□□ -1.59
RORAP35398 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.13□□□□□ -1.59
RORAP35398 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.13□□□□□ -1.59
RORAP35398 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
RORAP35398 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RORAP35398 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
RORAP35398 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.13□□□□□ -1.59
RORAP35398 AC104964.3-201ENST00000606115 2860 ntBASIC5.13□□□□□ -1.59
RORAP35398 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.13□□□□□ -1.59
RORAP35398 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RORAP35398 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
RORAP35398 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RORAP35398 OR55B1P-203ENST00000641518 2602 ntBASIC5.12□□□□□ -1.59
RORAP35398 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
RORAP35398 AC011493.1-201ENST00000596753 1632 ntBASIC5.12□□□□□ -1.59
RORAP35398 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
RORAP35398 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
RORAP35398 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RORAP35398 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.12□□□□□ -1.59
RORAP35398 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RORAP35398 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
RORAP35398 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
RORAP35398 RNU1-149P-201ENST00000390870 161 ntBASIC5.12□□□□□ -1.59
RORAP35398 AL645927.1-201ENST00000396783 406 ntBASIC5.12□□□□□ -1.59
RORAP35398 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.12□□□□□ -1.59
RORAP35398 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RORAP35398 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.12□□□□□ -1.59
RORAP35398 AC093655.2-201ENST00000425735 631 ntBASIC5.12□□□□□ -1.59
RORAP35398 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.12□□□□□ -1.59
RORAP35398 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RORAP35398 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.12□□□□□ -1.59
RORAP35398 GAPDHP25-201ENST00000447061 1001 ntBASIC5.12□□□□□ -1.59
RORAP35398 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.12□□□□□ -1.59
RORAP35398 SBDSP1-204ENST00000453858 737 ntBASIC5.12□□□□□ -1.59
RORAP35398 RN7SL610P-201ENST00000463845 291 ntBASIC5.12□□□□□ -1.59
RORAP35398 RN7SL329P-201ENST00000467740 299 ntBASIC5.12□□□□□ -1.59
RORAP35398 AC093270.2-201ENST00000486157 792 ntBASIC5.12□□□□□ -1.59
RORAP35398 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.12□□□□□ -1.59
RORAP35398 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.12□□□□□ -1.59
RORAP35398 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.12□□□□□ -1.59
RORAP35398 EIF4A2P5-201ENST00000529914 499 ntBASIC5.12□□□□□ -1.59
RORAP35398 HMGN2P6-201ENST00000551091 273 ntBASIC5.12□□□□□ -1.59
RORAP35398 NMNAT1P5-201ENST00000559657 841 ntBASIC5.12□□□□□ -1.59
RORAP35398 AC106730.2-201ENST00000566641 540 ntBASIC5.12□□□□□ -1.59
RORAP35398 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.12□□□□□ -1.59
RORAP35398 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.12□□□□□ -1.59
RORAP35398 AC244517.3-201ENST00000616254 1235 ntBASIC5.12□□□□□ -1.59
RORAP35398 AC090527.3-201ENST00000619041 548 ntBASIC5.12□□□□□ -1.59
RORAP35398 AP002505.2-201ENST00000623585 696 ntBASIC5.12□□□□□ -1.59
RORAP35398 AC074101.1-201ENST00000637861 241 ntBASIC5.12□□□□□ -1.59
RORAP35398 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.12□□□□□ -1.59
RORAP35398 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RORAP35398 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RORAP35398 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
RORAP35398 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RORAP35398 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.12□□□□□ -1.59
RORAP35398 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RORAP35398 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RORAP35398 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
RORAP35398 ZNF733P-202ENST00000444809 1573 ntBASIC5.12□□□□□ -1.59
RORAP35398 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
RORAP35398 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.11□□□□□ -1.59
RORAP35398 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.11□□□□□ -1.59
RORAP35398 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RORAP35398 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.11□□□□□ -1.59
RORAP35398 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RORAP35398 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
RORAP35398 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.11□□□□□ -1.59
RORAP35398 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RORAP35398 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.11□□□□□ -1.59
RORAP35398 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RORAP35398 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
RORAP35398 MIR765-201ENST00000390226 114 ntBASIC5.11□□□□□ -1.59
RORAP35398 OR4K12P-201ENST00000406538 961 ntBASIC5.11□□□□□ -1.59
RORAP35398 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.11□□□□□ -1.59
RORAP35398 NPM1P22-201ENST00000427761 952 ntBASIC5.11□□□□□ -1.59
RORAP35398 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.11□□□□□ -1.59
RORAP35398 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.11□□□□□ -1.59
RORAP35398 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.11□□□□□ -1.59
RORAP35398 AL389915.2-201ENST00000454576 441 ntBASIC5.11□□□□□ -1.59
RORAP35398 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.11□□□□□ -1.59
RORAP35398 COX6B1P2-201ENST00000489624 230 ntBASIC5.11□□□□□ -1.59
RORAP35398 AC015864.1-201ENST00000496512 544 ntBASIC5.11□□□□□ -1.59
RORAP35398 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.11□□□□□ -1.59
RORAP35398 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.11□□□□□ -1.59
RORAP35398 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
RORAP35398 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.11□□□□□ -1.59
RORAP35398 OR4A17P-201ENST00000526032 904 ntBASIC5.11□□□□□ -1.59
RORAP35398 OR4A46P-201ENST00000527255 933 ntBASIC5.11□□□□□ -1.59
RORAP35398 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.11□□□□□ -1.59
RORAP35398 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.11□□□□□ -1.59
RORAP35398 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms